RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 FAM223BA6NKX1 122 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 IGLV1-40P01703 118 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 FAM223AQ8IWN6 122 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 C10orf126Q8N4M7 172 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 UBE2D1P51668 147 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 SRSF2Q01130 221 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 ORMDL3Q8N138 153 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 C3orf22Q8N5N4 141 aa13.77□□□□□ -0.21
POLR2J3-205ENST00000489144 TRAV2A0A0B4J234 112 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 TRAV8-4A0A0B4J246 113 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 SLC25A20O43772 301 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 DNAJC9-AS1A6NH13 148 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
POLR2J3-205ENST00000489144 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
POLR2J3-205ENST00000489144 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
POLR2J3-205ENST00000489144 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
POLR2J3-205ENST00000489144 TRBV19A0A075B6N1 114 aa13.75□□□□□ -0.21
POLR2J3-205ENST00000489144 Q8N1Y9 231 aa13.75□□□□□ -0.21
POLR2J3-205ENST00000489144 ATP5LO75964 103 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 PSMB8P28062 276 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 KLK9Q2XQG4 91 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 KLK9Q9UKQ9 250 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 NIPBLQ6KC79 2804 aaeCLIP13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 GOLT1AQ6ZVE7 132 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 TMEM160Q9NX00 188 aa13.74□□□□□ -0.21
POLR2J3-205ENST00000489144 CD7P09564 240 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 AAMDCQ9H7C9 122 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 SIGLEC15Q6ZMC9 328 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 RNF182Q8N6D2 247 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 TMEM14CQ9P0S9 112 aa13.73□□□□□ -0.21
POLR2J3-205ENST00000489144 UQCRQO14949 82 aa13.72□□□□□ -0.21
POLR2J3-205ENST00000489144 FAM104BQ5XKR9 115 aa13.72□□□□□ -0.21
POLR2J3-205ENST00000489144 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
POLR2J3-205ENST00000489144 TRBV7-7A0A0K0K1E9 115 aa13.71□□□□□ -0.21
POLR2J3-205ENST00000489144 BUB3O43684 328 aa13.71□□□□□ -0.21
POLR2J3-205ENST00000489144 KHDC1LQ5JSQ8 128 aa13.71□□□□□ -0.21
POLR2J3-205ENST00000489144 LINC00526Q96FQ7 95 aa13.71□□□□□ -0.21
POLR2J3-205ENST00000489144 LY6G6DO95868 133 aa13.71□□□□□ -0.22
POLR2J3-205ENST00000489144 TCRAP04437 139 aa13.71□□□□□ -0.22
POLR2J3-205ENST00000489144 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.22
POLR2J3-205ENST00000489144 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 TNFRSF6BO95407 300 aa13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 NTN5Q8WTR8 489 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 USMG5Q96IX5 58 aa13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 METTL26Q96S19 204 aa13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 NSD1Q96L73 2696 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 WNK1Q9H4A3 2382 aa13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 KLK5Q9Y337 293 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-205ENST00000489144 IGKV2-40A0A087WW87 121 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 IGKV2D-40P01614 121 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 PRNTQ86SH4 94 aa13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 OTORQ9NRC9 128 aa13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 LEPP41159 167 aa13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 AMN1Q8IY45 258 aa13.69□□□□□ -0.22
POLR2J3-205ENST00000489144 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 MRPL51Q4U2R6 128 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 Q6ZSV7 163 aa13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 MRPL35Q9NZE8 188 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 H3BUA1 57 aa13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
POLR2J3-205ENST00000489144 LINC01546A6NGU7 62 aa13.67□□□□□ -0.22
POLR2J3-205ENST00000489144 DEFB1P60022 68 aa13.67□□□□□ -0.22
POLR2J3-205ENST00000489144 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-205ENST00000489144 RBAKDNA6NC62 111 aa13.67□□□□□ -0.22
POLR2J3-205ENST00000489144 NDUFA11Q86Y39 141 aa13.67□□□□□ -0.22
POLR2J3-205ENST00000489144 Q8TAT8 98 aa13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 PRAC2D3DTV9 90 aa13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 CKS2P33552 79 aa13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 Q86TA4 180 aa13.66□□□□□ -0.22
POLR2J3-205ENST00000489144 IGHV4OR15-8A0A075B7B6 117 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 A0A087WW49 117 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 ORM1P02763 201 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 FAM236AA0A1B0GUQ0 79 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 FAM236BA0A1B0GV22 79 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 A0A1W2PRX2 142 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 LGALS9O00182 355 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 IGLV2-11P01706 119 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 POM121L12Q8N7R1 296 aa13.65□□□□□ -0.22
POLR2J3-205ENST00000489144 INAFM1C9JVW0 142 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 NDUFA4O00483 81 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 LINC01600Q96MT4 127 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 JMJD1CQ15652 2540 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 ERCC8Q13216 396 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 ZNF56Q15929 161 aa13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 TEP1Q99973 2627 aaKnown RBP13.64□□□□□ -0.23
POLR2J3-205ENST00000489144 TRGV11A0A075B6L2 103 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 PLNP26678 52 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 C4orf26Q17RF5 130 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 SORL1Q92673 2214 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 TEX49A0A1B0GTD5 131 aa13.63□□□□□ -0.23
POLR2J3-205ENST00000489144 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms