RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 Q8N8P6 123 aa7.15□□□□□ -1.26
USP11-211ENST00000489111 HIST1H2BLQ99880 126 aa7.15□□□□□ -1.26
USP11-211ENST00000489111 SPATA25Q9BR10 227 aa7.15□□□□□ -1.26
USP11-211ENST00000489111 EDA2RQ9HAV5 297 aa7.15□□□□□ -1.26
USP11-211ENST00000489111 NIT2Q9NQR4 276 aa7.15□□□□□ -1.26
USP11-211ENST00000489111 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 K7EQD1 137 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 SPART-AS1P0CW21 52 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
USP11-211ENST00000489111 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 PACRGQ96M98 296 aaPredicted RBP7.14□□□□□ -1.27
USP11-211ENST00000489111 DKK2Q9UBU2 259 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
USP11-211ENST00000489111 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 IFITM10A6NMD0 228 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 PRSS47A8MTI9 375 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 PMCHL1Q16048 86 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 Q6ZSN1 163 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 SBSPONQ8IVN8 264 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 FAM19A2Q8N3H0 131 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 C18orf15Q96N68 181 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 TMEM70Q9BUB7 260 aa7.13□□□□□ -1.27
USP11-211ENST00000489111 C11orf68Q9H3H3 251 aaKnown RBP7.13□□□□□ -1.27
USP11-211ENST00000489111 NOTCH1P46531 2555 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 TRBV10-1A0A0K0K1A3 114 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 VCYO14598 125 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 P0DMU3 169 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 FAM231AP0DMU4 169 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 FAM231CP0DMU5 169 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 FCER1GP30273 86 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 LAGE3Q14657 143 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 NEGR1Q7Z3B1 354 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 CELA1Q9UNI1 258 aa7.12□□□□□ -1.27
USP11-211ENST00000489111 IGLV2-18A0A075B6J9 118 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 LINC01546A6NGU7 62 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 K7EMI3 77 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 TCAPO15273 167 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 HBDP02042 147 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 RPL36AP83881 106 aaKnown RBP7.11□□□□□ -1.27
USP11-211ENST00000489111 RHOHQ15669 191 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 SLC25A29Q8N8R3 303 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 NEXN-AS1Q8NBZ9 246 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 RPL36ALQ969Q0 106 aaKnown RBP7.11□□□□□ -1.27
USP11-211ENST00000489111 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 PRADC1Q9BSG0 188 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 ZMAT4Q9H898 229 aa7.11□□□□□ -1.27
USP11-211ENST00000489111 MUC4Q99102 2169 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 I3L3M4 83 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 NUDT3O95989 172 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 ATP5G1P05496 136 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
USP11-211ENST00000489111 FHL2Q14192 279 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 HSPB8Q9UJY1 196 aa7.1□□□□□ -1.27
USP11-211ENST00000489111 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 LEPROTL1O95214 131 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 HTN3P15516 51 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 BTF3P20290 206 aaKnown RBP7.09□□□□□ -1.27
USP11-211ENST00000489111 G0S2P27469 103 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 GAGE1Q13065 139 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 GAGE4Q13068 117 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 GAGE5Q13069 117 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 HHLA3Q9XRX5 114 aa7.09□□□□□ -1.27
USP11-211ENST00000489111 TRBV7-3A0A075B6L6 115 aa7.08□□□□□ -1.28
USP11-211ENST00000489111 KRTDAPP60985 99 aa7.08□□□□□ -1.28
USP11-211ENST00000489111 COTL1Q14019 142 aa7.08□□□□□ -1.28
USP11-211ENST00000489111 PRO0255Q9UI72 69 aa7.08□□□□□ -1.28
USP11-211ENST00000489111 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 F5H768 121 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 PAX4O43316 350 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 TSHBP01222 138 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 DAZ4Q86SG3 579 aaKnown RBP7.07□□□□□ -1.28
USP11-211ENST00000489111 DEFB104AQ8WTQ1 72 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 PHLDA1Q8WV24 401 aaPredicted RBP7.07□□□□□ -1.28
USP11-211ENST00000489111 B9D2Q9BPU9 175 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 DAZ3Q9NR90 486 aaKnown RBP7.07□□□□□ -1.28
USP11-211ENST00000489111 Q9UF83 564 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 CYSLTR1Q9Y271 337 aa7.07□□□□□ -1.28
USP11-211ENST00000489111 A0A096LNJ9 63 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 GYPEP15421 78 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 CRYBA4P53673 196 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 UBE2D3P61077 147 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 UBE2D2P62837 147 aa7.06□□□□□ -1.28
USP11-211ENST00000489111 C12orf74Q32Q52 190 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms