RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 STOML3Q8TAV4 291 aa10.09□□□□□ -0.79
TOM1-214ENST00000487670 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
TOM1-214ENST00000487670 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 GRIFINA4D1Z8 144 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 TPT1P13693 172 aaKnown RBP10.08□□□□□ -0.8
TOM1-214ENST00000487670 NKX2-5P52952 324 aaPredicted RBP10.08□□□□□ -0.8
TOM1-214ENST00000487670 RBX1P62877 108 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 RPL36AP83881 106 aaKnown RBP10.08□□□□□ -0.8
TOM1-214ENST00000487670 GAGE6Q13070 117 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOM1-214ENST00000487670 MAJINQ3KP22 176 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 NEXN-AS1Q8NBZ9 246 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 RPL36ALQ969Q0 106 aaKnown RBP10.08□□□□□ -0.8
TOM1-214ENST00000487670 IL36BQ9NZH7 164 aa10.08□□□□□ -0.8
TOM1-214ENST00000487670 MAP1LC3B2A6NCE7 125 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 ARMS2P0C7Q2 107 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 FLI1Q01543 452 aaPredicted RBP10.07□□□□□ -0.8
TOM1-214ENST00000487670 ZFP69Q49AA0 526 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 ARL6IP6Q8N6S5 226 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 CLRN3Q8NCR9 226 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 FAM213BQ8TBF2 198 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 MAP1LC3BQ9GZQ8 125 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 GFRA4Q9GZZ7 299 aa10.07□□□□□ -0.8
TOM1-214ENST00000487670 TRAV34A0A0B4J273 112 aa10.06□□□□□ -0.8
TOM1-214ENST00000487670 M0R036 132 aa10.06□□□□□ -0.8
TOM1-214ENST00000487670 RAB5CP51148 216 aa10.06□□□□□ -0.8
TOM1-214ENST00000487670 TMEM167BQ9NRX6 74 aa10.06□□□□□ -0.8
TOM1-214ENST00000487670 M0R381 172 aa10.05□□□□□ -0.8
TOM1-214ENST00000487670 UBE2G2P60604 165 aa10.05□□□□□ -0.8
TOM1-214ENST00000487670 EIF5AP63241 154 aaKnown RBP10.05□□□□□ -0.8
TOM1-214ENST00000487670 STPG4Q8N801 248 aa10.05□□□□□ -0.8
TOM1-214ENST00000487670 OR10G8Q8NGN5 311 aa10.05□□□□□ -0.8
TOM1-214ENST00000487670 TRBV10-1A0A0K0K1A3 114 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 A0A1B0GV50 99 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 B4DEV8 164 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 UMAD1C9J7I0 102 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 CRIP1P50238 77 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
TOM1-214ENST00000487670 A0A096LNI7 61 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 FAM74A7A6NL05 159 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 KRBOX1C9JBD0 128 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 SUMO1P63165 101 aaKnown RBP10.03□□□□□ -0.8
TOM1-214ENST00000487670 SLC51BQ86UW2 128 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 SFT2D1Q8WV19 159 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
TOM1-214ENST00000487670 A0A1W2PRE2 83 aa10.02□□□□□ -0.81
TOM1-214ENST00000487670 REG3AQ06141 175 aa10.02□□□□□ -0.81
TOM1-214ENST00000487670 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
TOM1-214ENST00000487670 MUC17Q685J3 4493 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 TMSB15BA0A087X1C1 80 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
TOM1-214ENST00000487670 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 H7C1H1 209 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 DNLZQ5SXM8 178 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
TOM1-214ENST00000487670 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
TOM1-214ENST00000487670 H2AFB1P0C5Y9 115 aa10□□□□□ -0.81
TOM1-214ENST00000487670 SULT1A2P50226 295 aa10□□□□□ -0.81
TOM1-214ENST00000487670 CCL20P78556 96 aa10□□□□□ -0.81
TOM1-214ENST00000487670 PRR27Q6MZM9 219 aa10□□□□□ -0.81
TOM1-214ENST00000487670 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
TOM1-214ENST00000487670 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
TOM1-214ENST00000487670 ZNF56Q15929 161 aa9.99□□□□□ -0.81
TOM1-214ENST00000487670 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
TOM1-214ENST00000487670 PEX7O00628 323 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 PAGE4O60829 102 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 SH2D1AO60880 128 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 IFNA7P01567 189 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 EIF5AL1Q6IS14 154 aaKnown RBP9.98□□□□□ -0.81
TOM1-214ENST00000487670 ALKAL2Q6UX46 152 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 Q86TA4 180 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 VAX2Q9UIW0 290 aa9.98□□□□□ -0.81
TOM1-214ENST00000487670 CST9LP1Q5W188 147 aa9.97□□□□□ -0.81
TOM1-214ENST00000487670 DERL1Q9BUN8 251 aa9.97□□□□□ -0.81
TOM1-214ENST00000487670 TRAV1-1A0A0B4J248 108 aa9.96□□□□□ -0.82
TOM1-214ENST00000487670 TRBV6-1A0A0K0K1D8 114 aa9.96□□□□□ -0.82
TOM1-214ENST00000487670 K7EQM0 130 aa9.96□□□□□ -0.82
TOM1-214ENST00000487670 SAPCD1Q5SSQ6 148 aa9.96□□□□□ -0.82
TOM1-214ENST00000487670 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
TOM1-214ENST00000487670 RPS10P46783 165 aaKnown RBP9.95□□□□□ -0.82
TOM1-214ENST00000487670 RAB4BP61018 213 aa9.95□□□□□ -0.82
TOM1-214ENST00000487670 ZFP82Q8N141 532 aa9.95□□□□□ -0.82
TOM1-214ENST00000487670 NKX6-2Q9C056 277 aaPredicted RBP9.95□□□□□ -0.82
TOM1-214ENST00000487670 GNG13Q9P2W3 67 aa9.95□□□□□ -0.82
TOM1-214ENST00000487670 A0A0U1RQV1 116 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 MUC21A0A140T8X8 626 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 PKIAP61925 76 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 Q6ZRP5 223 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 OR10AG1Q8NH19 301 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 HIST1H2BAQ96A08 127 aa9.94□□□□□ -0.82
TOM1-214ENST00000487670 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
TOM1-214ENST00000487670 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms