RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 SMIM2Q9BVW6 85 aa5.18□□□□□ -1.58
CCNB3-206ENST00000487204 MRPL16Q9NX20 251 aaKnown RBP5.18□□□□□ -1.58
CCNB3-206ENST00000487204 HSPB8Q9UJY1 196 aa5.18□□□□□ -1.58
CCNB3-206ENST00000487204 X6R8D5 127 aa5.18□□□□□ -1.58
CCNB3-206ENST00000487204 TRAV26-2A0A0B4J265 109 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 LOC389332A0A1B0GUA5 103 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 PRM2P04554 102 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 LAGE3Q14657 143 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 LINC00612Q8N6U2 182 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 JPT2Q9H910 190 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 TNFRSF18Q9Y5U5 241 aa5.17□□□□□ -1.58
CCNB3-206ENST00000487204 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
CCNB3-206ENST00000487204 TRBV27A0A0K0K1C4 114 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 TRBV6-4A0A1B0GX49 114 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 GAGE12BA1L429 117 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 NUPR1O60356 82 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 GAGE7O76087 117 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 HBDP02042 147 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 GAGE12FP0CL80 117 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 GAGE12GP0CL81 117 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 GAGE12IP0CL82 117 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 SPART-AS1P0CW21 52 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 SMIM6P0DI80 62 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 FCER1GP30273 86 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 LINC00310P59036 64 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 Q6ZTI0 123 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 TMEM70Q9BUB7 260 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
CCNB3-206ENST00000487204 IGLV2-18A0A075B6J9 118 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 TRGV4A0A0C4DH28 118 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 IGHV1-24A0A0C4DH33 117 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 IGHV4-28A0A0C4DH34 117 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 TMEM238LA0A1B0GVL6 79 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 SDHAF1A6NFY7 115 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 IFITM10A6NMD0 228 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 I3L3M4 83 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 K7EQD1 137 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 LEPROTL1O95214 131 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 GATA1P15976 413 aaPredicted RBP5.15□□□□□ -1.59
CCNB3-206ENST00000487204 POLR2KP53803 58 aaKnown RBP5.15□□□□□ -1.59
CCNB3-206ENST00000487204 EMP1P54849 157 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 RPL36AP83881 106 aaKnown RBP5.15□□□□□ -1.59
CCNB3-206ENST00000487204 RHOHQ15669 191 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 Q8NAQ8 132 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 RPL36ALQ969Q0 106 aaKnown RBP5.15□□□□□ -1.59
CCNB3-206ENST00000487204 URB1-AS1Q96HZ7 61 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 PRADC1Q9BSG0 188 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 MUC4Q99102 2169 aa5.15□□□□□ -1.59
CCNB3-206ENST00000487204 TRBV7-3A0A075B6L6 115 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 IGHV3-73A0A0B4J1V6 119 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 C20orf202A1L168 122 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 ATP5LO75964 103 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 GAS8-AS1O95177 125 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 NUDT3O95989 172 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 BTF3P20290 206 aaKnown RBP5.14□□□□□ -1.59
CCNB3-206ENST00000487204 DAD1P61803 113 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 SMAGPQ0VAQ4 97 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 FAM222AQ5U5X8 452 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 DAZ4Q86SG3 579 aaKnown RBP5.14□□□□□ -1.59
CCNB3-206ENST00000487204 FAM19A2Q8N3H0 131 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 RPL39LQ96EH5 51 aaKnown RBP5.14□□□□□ -1.59
CCNB3-206ENST00000487204 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 SPATA25Q9BR10 227 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 MAP1LC3CQ9BXW4 147 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 C11orf68Q9H3H3 251 aaKnown RBP5.14□□□□□ -1.59
CCNB3-206ENST00000487204 DAZ3Q9NR90 486 aaKnown RBP5.14□□□□□ -1.59
CCNB3-206ENST00000487204 DKK2Q9UBU2 259 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 NOTCH3Q9UM47 2321 aa5.14□□□□□ -1.59
CCNB3-206ENST00000487204 ATP5G1P05496 136 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 DEFB130BP0DP73 79 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 DEFB130AP0DP74 79 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 JOSD1Q15040 202 aaPredicted RBP5.13□□□□□ -1.59
CCNB3-206ENST00000487204 TMEM97Q5BJF2 176 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 DEFB121Q5J5C9 76 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 NEXN-AS1Q8NBZ9 246 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 ZMAT4Q9H898 229 aa5.13□□□□□ -1.59
CCNB3-206ENST00000487204 COL6A5A8TX70 2615 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 NPSP0C0P6 89 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 KRTDAPP60985 99 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 COTL1Q14019 142 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 FHL2Q14192 279 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 PET117Q6UWS5 81 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 SH2D6Q7Z4S9 175 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 SPATA12Q7Z6I5 190 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 SLC25A29Q8N8R3 303 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 TOMM6Q96B49 74 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 PRO0255Q9UI72 69 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 HHLA3Q9XRX5 114 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 CYSLTR1Q9Y271 337 aa5.12□□□□□ -1.59
CCNB3-206ENST00000487204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.11□□□□□ -1.59
CCNB3-206ENST00000487204 K7EIL1 84 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 SCGB1D1O95968 90 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 S100A12P80511 92 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 ERASQ7Z444 233 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 ZNRF2Q8NHG8 242 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
CCNB3-206ENST00000487204 TMEM141Q96I45 108 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms