RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 HHLA3Q9XRX5 114 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 SORL1Q92673 2214 aa4.96□□□□□ -1.62
UBR4-214ENST00000486515 PAX4O43316 350 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 SCO1O75880 301 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
UBR4-214ENST00000486515 RPL36AP83881 106 aaKnown RBP4.95□□□□□ -1.62
UBR4-214ENST00000486515 FAM104BQ5XKR9 115 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 RPL36ALQ969Q0 106 aaKnown RBP4.95□□□□□ -1.62
UBR4-214ENST00000486515 ZNF479Q96JC4 524 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 CELA1Q9UNI1 258 aa4.95□□□□□ -1.62
UBR4-214ENST00000486515 KLK5Q9Y337 293 aaPredicted RBP4.95□□□□□ -1.62
UBR4-214ENST00000486515 TRBV10-1A0A0K0K1A3 114 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 TRBV6-4A0A1B0GX49 114 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 A0A1B0GXF2 115 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 NUPR2A6NF83 97 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 K7EQD1 137 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 RAB5AP20339 215 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 C12orf74Q32Q52 190 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 OR10J3Q5JRS4 329 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 TMEM136Q6ZRR5 245 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 Q6ZTC4 211 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 SH2D6Q7Z4S9 175 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 AMN1Q8IY45 258 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 MRPL18Q9H0U6 180 aaKnown RBP4.94□□□□□ -1.62
UBR4-214ENST00000486515 JPT2Q9H910 190 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 NIT2Q9NQR4 276 aa4.94□□□□□ -1.62
UBR4-214ENST00000486515 A0A1B0GV90 55 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 D6R8Y8 96 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 CRYGDP07320 174 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 SRIP30626 198 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
UBR4-214ENST00000486515 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 LINC00612Q8N6U2 182 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 PHLDA1Q8WV24 401 aaPredicted RBP4.93□□□□□ -1.62
UBR4-214ENST00000486515 C14orf144Q96I85 54 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 DNAJC30Q96LL9 226 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 PRELID3AQ96N28 172 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 SAMD10Q9BYL1 202 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 LAMTOR2Q9Y2Q5 125 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
UBR4-214ENST00000486515 DNAH3Q8TD57 4116 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 A0A0J9YY99 117 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GAGE12JA6NER3 117 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 C1orf196B1AJZ1 125 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 IGLL5B9A064 214 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 NUDT3O95989 172 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GYPEP15421 78 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GATA1P15976 413 aaPredicted RBP4.92□□□□□ -1.62
UBR4-214ENST00000486515 G0S2P27469 103 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 RAB5BP61020 215 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GAGE4Q13068 117 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GAGE5Q13069 117 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 FHL2Q14192 279 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 MRPL23Q16540 153 aaKnown RBP4.92□□□□□ -1.62
UBR4-214ENST00000486515 GAGE13Q4V321 117 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 TMEM97Q5BJF2 176 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 SUMO4Q6EEV6 95 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 GATD1Q8NB37 220 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 PRSS3P2Q8NHM4 247 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 KIR2DL4Q99706 377 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 MAP1LC3AQ9H492 121 aa4.92□□□□□ -1.62
UBR4-214ENST00000486515 TRBV7-3A0A075B6L6 115 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 TRAV26-2A0A0B4J265 109 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 COLCA2A8K830 154 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 H3BNG1 76 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 PHOX2AO14813 284 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 TRGC2P03986 189 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 PMCHP20382 165 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 FCER1GP30273 86 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 CRYBA4P53673 196 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 ODF1Q14990 250 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 KIAA1644Q3SXP7 199 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 MRPL51Q4U2R6 128 aaKnown RBP4.91□□□□□ -1.62
UBR4-214ENST00000486515 DAZ4Q86SG3 579 aaKnown RBP4.91□□□□□ -1.62
UBR4-214ENST00000486515 POM121L12Q8N7R1 296 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 ZNRF2Q8NHG8 242 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
UBR4-214ENST00000486515 DAZ3Q9NR90 486 aaKnown RBP4.91□□□□□ -1.62
UBR4-214ENST00000486515 C5orf52A6NGY3 159 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 M0QY20 66 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 VCYO14598 125 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 TNFRSF6BO95407 300 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 NCR2O95944 276 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 TCTAP57738 103 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 SUMO2P61956 95 aaKnown RBP4.9□□□□□ -1.63
UBR4-214ENST00000486515 SMAGPQ0VAQ4 97 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 CEMP1Q6PRD7 247 aaPredicted RBP4.9□□□□□ -1.63
UBR4-214ENST00000486515 FA2HQ7L5A8 372 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 NEGR1Q7Z3B1 354 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 ATP6V0E2Q8NHE4 81 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
UBR4-214ENST00000486515 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms