RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MCFD2Q8NI22 146 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 CMTM2Q8TAZ6 248 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 SLC25A21Q9BQT8 299 aaPredicted RBP4.83□□□□□ -1.64
XRN1-212ENST00000486211 NDFIP1Q9BT67 221 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 IGSF23A1L1A6 192 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 L7N2F9 121 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 RGS5O15539 181 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 S100A11P31949 105 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 BCAP31P51572 246 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 VAMP2P63027 116 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 CTF1Q16619 201 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
XRN1-212ENST00000486211 KRTAP11-1Q8IUC1 163 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 RETNLBQ9BQ08 111 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 GSKIPQ9P0R6 139 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
XRN1-212ENST00000486211 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
XRN1-212ENST00000486211 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 TRAV6A0A075B6T7 132 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 A0A1B0GUV1 79 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 ARMS2P0C7Q2 107 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 SULT1A1P50225 295 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 SMUG1Q53HV7 270 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 DNLZQ5SXM8 178 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 DERL1Q9BUN8 251 aa4.81□□□□□ -1.64
XRN1-212ENST00000486211 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
XRN1-212ENST00000486211 EIF3GO75821 320 aaKnown RBP eCLIP4.8□□□□□ -1.64
XRN1-212ENST00000486211 FAUP35544 74 aaKnown RBP4.8□□□□□ -1.64
XRN1-212ENST00000486211 RAB4BP61018 213 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 MT1HP80294 61 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 C9orf116Q5BN46 136 aaPredicted RBP4.8□□□□□ -1.64
XRN1-212ENST00000486211 FAM74A1Q5RGS3 127 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 TMEM252Q8N6L7 170 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 LINC00526Q96FQ7 95 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 CARD19Q96LW7 228 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 NAA50Q9GZZ1 169 aaKnown RBP4.8□□□□□ -1.64
XRN1-212ENST00000486211 MBD2Q9UBB5 411 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
XRN1-212ENST00000486211 IGHV1-24A0A0C4DH33 117 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 M0R381 172 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 CFC1BP0CG36 223 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 ATP6V1FQ16864 119 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 KHDC3LQ587J8 217 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.79□□□□□ -1.64
XRN1-212ENST00000486211 AQP10Q96PS8 301 aa4.79□□□□□ -1.64
XRN1-212ENST00000486211 LSM5Q9Y4Y9 91 aaKnown RBP4.79□□□□□ -1.64
XRN1-212ENST00000486211 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 SERTM2A0A1B0GWG4 89 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 B4DEV8 164 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 KRBOX1C9JBD0 128 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 TCRAP04437 139 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 SULT1A2P50226 295 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
XRN1-212ENST00000486211 EIF5AP63241 154 aaKnown RBP4.78□□□□□ -1.64
XRN1-212ENST00000486211 HBG1P69891 147 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 HBG2P69892 147 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 FLI1Q01543 452 aaPredicted RBP4.78□□□□□ -1.64
XRN1-212ENST00000486211 FAM162BQ5T6X4 162 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 Q9H521 79 aa4.78□□□□□ -1.64
XRN1-212ENST00000486211 RSL24D1Q9UHA3 163 aaKnown RBP4.78□□□□□ -1.64
XRN1-212ENST00000486211 A0A087WZ39 114 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 A0A087X002 238 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 ZNF56Q15929 161 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 PRNTQ86SH4 94 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 STX12Q86Y82 276 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 ZFP82Q8N141 532 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 CHCHD10Q8WYQ3 142 aaPredicted RBP4.77□□□□□ -1.65
XRN1-212ENST00000486211 FLVCR2Q9UPI3 526 aa4.77□□□□□ -1.65
XRN1-212ENST00000486211 LOC107984640A0A0U1RRK4 108 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 FABP5P3A8MUU1 101 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 CRIP1P50238 77 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 TAS2R45P59539 299 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 SYCNQ0VAF6 134 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 ZNF674Q2M3X9 581 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 TOMM5Q8N4H5 51 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 C5orf17Q8NAS9 161 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 TMEM243Q9BU79 118 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 VCX3AQ9NNX9 186 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 KCNIP2Q9NS61 270 aa4.76□□□□□ -1.65
XRN1-212ENST00000486211 A0A087WXM4 84 aa4.75□□□□□ -1.65
XRN1-212ENST00000486211 M0R036 132 aa4.75□□□□□ -1.65
XRN1-212ENST00000486211 BCL2P10415 239 aa4.75□□□□□ -1.65
XRN1-212ENST00000486211 TPT1P13693 172 aaKnown RBP4.75□□□□□ -1.65
XRN1-212ENST00000486211 AP3S2P59780 193 aa4.75□□□□□ -1.65
XRN1-212ENST00000486211 SAPCD1Q5SSQ6 148 aa4.75□□□□□ -1.65
XRN1-212ENST00000486211 SDHCQ99643 169 aaPredicted RBP4.75□□□□□ -1.65
XRN1-212ENST00000486211 WDR61Q9GZS3 305 aaKnown RBP4.75□□□□□ -1.65
XRN1-212ENST00000486211 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms