RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 ZNF479Q96JC4 524 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 DNAJC30Q96LL9 226 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 PRADC1Q9BSG0 188 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 SAMD10Q9BYL1 202 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 PRO0255Q9UI72 69 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 IGHV3-73A0A0B4J1V6 119 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 D6R8Y8 96 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 K7EQD1 137 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 M0QY20 66 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 GATA1P15976 413 aaPredicted RBP4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 RAB5BP61020 215 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 FHL2Q14192 279 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 RHOHQ15669 191 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 OR10J3Q5JRS4 329 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 C20orf78Q9BR46 151 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 NIT2Q9NQR4 276 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 HHLA3Q9XRX5 114 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
PDZRN3-209ENST00000484487 TRAV10A0A0B4J240 114 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 F5H768 121 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 H3BNG1 76 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 TNFRSF6BO95407 300 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 SRIP30626 198 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 CRYBA4P53673 196 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 SLC25A29Q8N8R3 303 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 RPL36ALQ969Q0 106 aaKnown RBP4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 ALKBH7Q9BT30 221 aaPredicted RBP4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 MAP1LC3AQ9H492 121 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 ST20Q9HBF5 79 aa4.59□□□□□ -1.67
PDZRN3-209ENST00000484487 TRBV7-3A0A075B6L6 115 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 DEFB131BA0A096LNP1 70 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 TRAV26-2A0A0B4J265 109 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 K7EMI3 77 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 VCYO14598 125 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 TCAPO15273 167 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 NCR2O95944 276 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 HTN3P15516 51 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 PMCHP20382 165 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 HOXA5P20719 270 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 NANOS2P60321 138 aaKnown RBP4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 SUMO2P61956 95 aaKnown RBP4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 RPL32P62910 135 aaKnown RBP4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 Q6ZTC4 211 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 NRACQ8N912 160 aa4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 NXT2Q9NPJ8 142 aaKnown RBP4.58□□□□□ -1.68
PDZRN3-209ENST00000484487 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 NPYP01303 97 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 G0S2P27469 103 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 Q0VG73 95 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 TMEM97Q5BJF2 176 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 Q6ZSN1 163 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 DAZ4Q86SG3 579 aaKnown RBP4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 BAGE3Q86Y29 109 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 Q8N8P6 123 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 ZNRF2Q8NHG8 242 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 PRSS3P2Q8NHM4 247 aa4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 RPL39LQ96EH5 51 aaKnown RBP4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 DAZ3Q9NR90 486 aaKnown RBP4.57□□□□□ -1.68
PDZRN3-209ENST00000484487 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 LOC389332A0A1B0GUA5 103 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 I3L3M4 83 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BKO60814 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 S100A6P06703 90 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BJP06899 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 GYPEP15421 78 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BOP23527 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BBP33778 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BDP58876 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BCP62807 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST2H2BEQ16778 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 FA2HQ7L5A8 372 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 C15orf53Q8NAA6 179 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 NEXN-AS1Q8NBZ9 246 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 PHLDA1Q8WV24 401 aaPredicted RBP4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BHQ93079 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BNQ99877 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 HIST1H2BMQ99879 126 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 SMIM2Q9BVW6 85 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 ICOSQ9Y6W8 199 aa4.56□□□□□ -1.68
PDZRN3-209ENST00000484487 A0A0J9YY99 117 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 GAGE12JA6NER3 117 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 LINC01549A6NIU2 74 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms