RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, human

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-210	ENST00000484077	PDE6D	O43924	150 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	ORM1	P02763	201 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	SRI	P30626	198 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	CCL20	P78556	96 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	SLA	Q13239	276 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	ZNF674	Q2M3X9	581 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	CENPW	Q5EE01	88 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	ZNRF2	Q8NHG8	242 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	UPK3B	Q9BT76	320 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	IL36B	Q9NZH7	164 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	MRPS16	Q9Y3D3	137 aa	Known RBP	4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	LINC00588	Q9Y4M8	146 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	BIRC6	Q9NR09	4857 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	DNAH17	Q9UFH2	4485 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	GRIFIN	A4D1Z8	144 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	PGPEP1L	A6NFU8	196 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077		K7EQD1	137 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	RS1	O15537	224 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	CXCL1	P09341	107 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	TAGLN2	P37802	199 aa	Known RBP	4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	GNG4	P50150	75 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	CRIP1	P50238	77 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	RPL19	P84098	196 aa	Known RBP	4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	UBE2V1	Q13404	147 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	RHOH	Q15669	191 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	MRPL23	Q16540	153 aa	Known RBP	4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	DNLZ	Q5SXM8	178 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	CFAP126	Q5VTH2	177 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	BAGE2	Q86Y30	109 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	SMIM12	Q96EX1	92 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	PARL	Q9H300	379 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	VAX2	Q9UIW0	290 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077	HHLA3	Q9XRX5	114 aa		4.19	□□□□□ -1.74
RIF1-210	ENST00000484077		A0A087X002	238 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	IGHV3-73	A0A0B4J1V6	119 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	LOC100131303	A0A0U1RQF7	123 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	NBDY	A0A0U1RRE5	68 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	NDUFAF8	A1L188	74 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077		A8MWV9	139 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077		M0R381	172 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	ARMS2	P0C7Q2	107 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	MGST1	P10620	155 aa	Known RBP	4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	GATA1	P15976	413 aa	Predicted RBP	4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	ESRG	Q1W209	222 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	TTC32	Q5I0X7	151 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077		Q6ZR54	194 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	NEGR1	Q7Z3B1	354 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	ZFP82	Q8N141	532 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	PTH2	Q96A98	100 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	PHLDA3	Q9Y5J5	127 aa		4.18	□□□□□ -1.74
RIF1-210	ENST00000484077	TRBV20OR9-2	A0A075B6H5	130 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	TRBV6-4	A0A1B0GX49	114 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	RTL8C	O15255	209 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	NXPH4	O95158	308 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	IGLV2-8	P01709	118 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	CAMP	P49913	170 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	SOHLH1	Q5JUK2	328 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	FAM74A4	Q5TZK3	123 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	ZFP2	Q6ZN57	461 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	LINC00336	Q6ZUF6	198 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	SLC25A29	Q8N8R3	303 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	PRADC1	Q9BSG0	188 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	MED9	Q9NWA0	146 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077	PKD1	P98161	4303 aa		4.17	□□□□□ -1.74
RIF1-210	ENST00000484077		A0A1W2PPQ1	181 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	RAB19	A4D1S5	217 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	C19orf71	A6NCJ1	209 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	RBFOX3	A6NFN3	312 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	TMEM250	H0YL14	139 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	SIVA1	O15304	175 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	SNAI2	O43623	268 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	C1orf134	Q5TEV5	83 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	WFDC10B	Q8IUB3	73 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	C6orf223	Q8N319	242 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	OR10AG1	Q8NH19	301 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	LYPD6B	Q8NI32	183 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	AP1S3	Q96PC3	154 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077		Q9H8V8	135 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	JPT2	Q9H910	190 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	PKHD1	P08F94	4074 aa		4.16	□□□□□ -1.74
RIF1-210	ENST00000484077	XKRY2	A2RUG3	117 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077		P01737	135 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	OR5AL1	P0C617	328 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	LINC00694	P0DN24	101 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	CEBPG	P53567	150 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	RPS20	P60866	119 aa	Known RBP	4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	ZNF56	Q15929	161 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	SPANXN1	Q5VSR9	72 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	UFSP1	Q6NVU6	142 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	LYPD5	Q6UWN5	251 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	SH2D6	Q7Z4S9	175 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	OR2D3	Q8NGH3	330 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	SFRP2	Q96HF1	295 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	FAM210A	Q96ND0	272 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	TPPP3	Q9BW30	176 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	SAMD10	Q9BYL1	202 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	BIN3	Q9NQY0	253 aa		4.15	□□□□□ -1.75
RIF1-210	ENST00000484077	MUC21	A0A0G2JKD1	596 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077	MUC21	A0A140T8X8	626 aa		4.14	□□□□□ -1.75
RIF1-210	ENST00000484077		A0A1B0GVY2	172 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms