RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 FRAS1Q86XX4 4008 aa9.96□□□□□ -0.82
SMAD9-204ENST00000483941 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
SMAD9-204ENST00000483941 IGHV3-53P01767 116 aa9.95□□□□□ -0.82
SMAD9-204ENST00000483941 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
SMAD9-204ENST00000483941 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
SMAD9-204ENST00000483941 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
SMAD9-204ENST00000483941 TNFRSF6BO95407 300 aa9.94□□□□□ -0.82
SMAD9-204ENST00000483941 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
SMAD9-204ENST00000483941 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
SMAD9-204ENST00000483941 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
SMAD9-204ENST00000483941 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
SMAD9-204ENST00000483941 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
SMAD9-204ENST00000483941 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 K7EMI3 77 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 M0QY20 66 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 TCAPO15273 167 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 ATP5G1P05496 136 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 PMCHP20382 165 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 NDUFA6P56556 154 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
SMAD9-204ENST00000483941 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 PRADC1Q9BSG0 188 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 RETNQ9HD89 108 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 TNFRSF18Q9Y5U5 241 aa9.93□□□□□ -0.82
SMAD9-204ENST00000483941 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 DEFB4AO15263 64 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 NCR2O95944 276 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
SMAD9-204ENST00000483941 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
SMAD9-204ENST00000483941 ZFAND6Q6FIF0 208 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 CHCHD1Q96BP2 118 aaKnown RBP9.92□□□□□ -0.82
SMAD9-204ENST00000483941 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
SMAD9-204ENST00000483941 IGHV3-73A0A0B4J1V6 119 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 VCYO14598 125 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 G0S2P27469 103 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 RHOHQ15669 191 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 NRACQ8N912 160 aa9.91□□□□□ -0.82
SMAD9-204ENST00000483941 HERC2O95714 4834 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 K7EQD1 137 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 NPYP01303 97 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 LINC00614P0C842 121 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 GATA1P15976 413 aaPredicted RBP9.9□□□□□ -0.82
SMAD9-204ENST00000483941 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
SMAD9-204ENST00000483941 C11orf45Q8TAV5 145 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
SMAD9-204ENST00000483941 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 HHLA3Q9XRX5 114 aa9.9□□□□□ -0.82
SMAD9-204ENST00000483941 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
SMAD9-204ENST00000483941 FHL2Q14192 279 aa9.89□□□□□ -0.83
SMAD9-204ENST00000483941 Q8N8P6 123 aa9.89□□□□□ -0.83
SMAD9-204ENST00000483941 KIR2DL4Q99706 377 aa9.89□□□□□ -0.83
SMAD9-204ENST00000483941 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
SMAD9-204ENST00000483941 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 HSBP1O75506 76 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 S100A2P29034 98 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 NIT1Q86X76 327 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
SMAD9-204ENST00000483941 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
SMAD9-204ENST00000483941 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 TRBV7-3A0A075B6L6 115 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 SDHAF1A6NFY7 115 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 I3L3M4 83 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 ESDP10768 282 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 C12orf74Q32Q52 190 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 ORMDL2Q53FV1 153 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 RNASEKQ6P5S7 137 aaKnown RBP9.87□□□□□ -0.83
SMAD9-204ENST00000483941 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
SMAD9-204ENST00000483941 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
SMAD9-204ENST00000483941 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
SMAD9-204ENST00000483941 TRBV27A0A0K0K1C4 114 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 C5orf52A6NGY3 159 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 PAX4O43316 350 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 HOXA5P20719 270 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 IFI27P40305 119 aaPredicted RBP9.86□□□□□ -0.83
SMAD9-204ENST00000483941 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
SMAD9-204ENST00000483941 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
SMAD9-204ENST00000483941 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 TMEM70Q9BUB7 260 aa9.86□□□□□ -0.83
SMAD9-204ENST00000483941 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 F5H768 121 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 SERF1AO75920 110 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 GAS8-AS1O95177 125 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 FCER1GP30273 86 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 CRYBA4P53673 196 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 LAGE3Q14657 143 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 Q6ZSN1 163 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
SMAD9-204ENST00000483941 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
SMAD9-204ENST00000483941 H3BNG1 76 aa9.84□□□□□ -0.83
SMAD9-204ENST00000483941 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
SMAD9-204ENST00000483941 TMEM18Q96B42 140 aa9.84□□□□□ -0.83
SMAD9-204ENST00000483941 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms