RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 DPM2O94777 84 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 PEMTQ9UBM1 199 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 MEGF8Q7Z7M0 2845 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 SMIM13P0DJ93 91 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 CRYBA4P53673 196 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 LAGE3Q14657 143 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 SCGB3A1Q96QR1 104 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 GNRH2O43555 120 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 EMP1P54849 157 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
LIMK1-205ENST00000483414 FAM74A4Q5TZK3 123 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
LIMK1-205ENST00000483414 SPAG8Q99932 426 aaPredicted RBP7.14□□□□□ -1.27
LIMK1-205ENST00000483414 TRAV2A0A0B4J234 112 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 BEAN1Q3B7T3 259 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 CD300EQ496F6 205 aaPredicted RBP7.13□□□□□ -1.27
LIMK1-205ENST00000483414 DPF1Q92782 380 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 PTH2Q96A98 100 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 U3KQK5 164 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 NACAE9PAV3 2078 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 TMEM61Q8N0U2 210 aa7.13□□□□□ -1.27
LIMK1-205ENST00000483414 Q8N8P6 123 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 ATP5LO75964 103 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 K7EQG2 157 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 ASIPP42127 132 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 KRTAP10-11P60412 298 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 ODF1Q14990 250 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
LIMK1-205ENST00000483414 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
LIMK1-205ENST00000483414 TRAV25A0A0B4J276 109 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 PRR9Q5T870 116 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 PF4P02776 101 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 A0A087WWL8 130 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
LIMK1-205ENST00000483414 DYNC2H1Q8NCM8 4307 aaKnown RBP7.1□□□□□ -1.27
LIMK1-205ENST00000483414 COL7A1Q02388 2944 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 TRBV25-1A0A075B6N4 114 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 A8MTW9 85 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 SRSF9Q13242 221 aaKnown RBP eCLIP7.1□□□□□ -1.27
LIMK1-205ENST00000483414 GATD1Q8NB37 220 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 A0A1B0GWB2 263 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
LIMK1-205ENST00000483414 A0A1B0GV72 72 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 C9orf66Q5T8R8 295 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 SPANXB1Q9NS25 103 aaPredicted RBP7.09□□□□□ -1.27
LIMK1-205ENST00000483414 MT-ATP8P03928 68 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 CD7P09564 240 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 ZNF688P0C7X2 276 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 FAM110AQ9BQ89 295 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 JPT2Q9H910 190 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 RBAKDNA6NC62 111 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 Q8N1Y9 231 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 ZNF479Q96JC4 524 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 LINC00477Q96M19 166 aa7.09□□□□□ -1.27
LIMK1-205ENST00000483414 GEMIN7Q9H840 131 aaKnown RBP7.09□□□□□ -1.27
LIMK1-205ENST00000483414 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
LIMK1-205ENST00000483414 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 TRAV12-2A0A075B6T6 113 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 C9orf47Q6ZRZ4 202 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 ZNF575Q86XF7 245 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 SYT8Q8NBV8 401 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 HHLA3Q9XRX5 114 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 OR5A1Q8NGJ0 315 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 DPH3P1Q9H4G8 78 aa7.08□□□□□ -1.28
LIMK1-205ENST00000483414 OXLD1Q5BKU9 147 aa7.07□□□□□ -1.28
LIMK1-205ENST00000483414 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
LIMK1-205ENST00000483414 MRPL53Q96EL3 112 aaKnown RBP7.07□□□□□ -1.28
LIMK1-205ENST00000483414 PSMG4Q5JS54 123 aa7.07□□□□□ -1.28
LIMK1-205ENST00000483414 MAP6D1Q9H9H5 199 aa7.07□□□□□ -1.28
LIMK1-205ENST00000483414 LOC107984156A0A0G2JMH3 177 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 H7C1H1 209 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 ARL17AQ8IVW1 177 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 NRACQ8N912 160 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 A0A087WX48 190 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 IGLL5B9A064 214 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 SIVA1O15304 175 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 APOMO95445 188 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 RNF183Q96D59 192 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 KIR2DL4Q99706 377 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 ZNF56Q15929 161 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 CNFNQ9BYD5 112 aa7.06□□□□□ -1.28
LIMK1-205ENST00000483414 CEND1Q8N111 149 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 IGHV3-64A0A075B6Q5 118 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms