RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LINC00299Q6ZSB3 139 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 PRNTQ86SH4 94 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 OR2T35Q8NGX2 323 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 S100ZQ8WXG8 99 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
CSDE1-207ENST00000483407 FABP5P3A8MUU1 101 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 IGLV2-8P01709 118 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 MBP02144 154 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 STAG3L2P0CL84 134 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 STAG3L3P0CL85 134 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 GCHFRP30047 84 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 Q0VG73 95 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 NIT1Q86X76 327 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 OR2G3Q8NGZ4 309 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 LINC00479Q96M42 142 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 WFDC1Q9HC57 220 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 TMEM167BQ9NRX6 74 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 IL36BQ9NZH7 164 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 EPDR1Q9UM22 224 aa3.83□□□□□ -1.8
CSDE1-207ENST00000483407 IGKV3D-20A0A0C4DH25 116 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 UPK1BO75841 260 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 CXorf1O96002 111 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 IGLV2-11P01706 119 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 CRPP02741 224 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
CSDE1-207ENST00000483407 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
CSDE1-207ENST00000483407 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-207ENST00000483407 HSD17B11Q8NBQ5 300 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 SUN5Q8TC36 379 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 SAMD10Q9BYL1 202 aa3.82□□□□□ -1.8
CSDE1-207ENST00000483407 TRBV10-1A0A0K0K1A3 114 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 A0A1W2PRE2 83 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 B4DEV8 164 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 H3BVH4 76 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 IFNA7P01567 189 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 ARMS2P0C7Q2 107 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 KRTAP10-4P60372 401 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-207ENST00000483407 SERF2P84101 59 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 UFSP1Q6NVU6 142 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 ATRAIDQ6UW56 229 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-207ENST00000483407 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 PSMG3Q9BT73 122 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-207ENST00000483407 ACTR3CQ9C0K3 210 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-207ENST00000483407 JPT2Q9H910 190 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 Q9UF83 564 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 PHLDA3Q9Y5J5 127 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 ARL2-SNX15V9GYD0 113 aa3.81□□□□□ -1.8
CSDE1-207ENST00000483407 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 M0R036 132 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 M0R381 172 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 TPT1P13693 172 aaKnown RBP3.8□□□□□ -1.8
CSDE1-207ENST00000483407 ATP6V0CP27449 155 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 DEFA1P59665 94 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 DEFA3P59666 94 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 PKIAP61925 76 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 DNLZQ5SXM8 178 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 ZFP82Q8N141 532 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 C15orf54Q8N8G6 183 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 HIST1H2BAQ96A08 127 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 DNAJC30Q96LL9 226 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 ALKBH7Q9BT30 221 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-207ENST00000483407 NKX6-2Q9C056 277 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-207ENST00000483407 TNFSF18Q9UNG2 199 aa3.8□□□□□ -1.8
CSDE1-207ENST00000483407 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 GRIFINA4D1Z8 144 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 KRBOX1C9JBD0 128 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 PEX7O00628 323 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 SH2D1AO60880 128 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 HLA-DQA1P01909 254 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
CSDE1-207ENST00000483407 UBE2D3P61077 147 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 UBE2G1P62253 170 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 UBE2D2P62837 147 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 MIAQ16674 131 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 KIAA1644Q3SXP7 199 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 FAM162BQ5T6X4 162 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 Q86TA4 180 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 STPG4Q8N801 248 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 ZC2HC1AQ96GY0 325 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 AQP10Q96PS8 301 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 ZFP30Q9Y2G7 519 aa3.79□□□□□ -1.8
CSDE1-207ENST00000483407 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 BORCS7-ASMTA0A0B4J1R7 106 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 A0A0D9SG52 128 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 PTTG1O95997 202 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 UBE2G2P60604 165 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 RAB4BP61018 213 aa3.78□□□□□ -1.8
CSDE1-207ENST00000483407 RPL19P84098 196 aaKnown RBP3.78□□□□□ -1.8
CSDE1-207ENST00000483407 IFITM3Q01628 133 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms