RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 RPL39LQ96EH5 51 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 CXXC4Q9H2H0 198 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 IGHV3-72A0A0B4J1Y9 119 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 IGKV3D-20A0A0C4DH25 116 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 C11orf21Q9P2W6 132 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 BUB3O43684 328 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 IGKV1-17P01599 117 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 LOXP28300 417 aaPredicted RBP5.87□□□□□ -1.47
COL4A5-205ENST00000483338 C6orf226Q5I0X4 101 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 SPENQ96T58 3664 aaKnown RBP5.87□□□□□ -1.47
COL4A5-205ENST00000483338 TRAV12-3A0A0B4J271 114 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 MRGPRG-AS1Q2M3A8 158 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 DAND5Q8N907 189 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 LITAFQ99732 161 aa5.87□□□□□ -1.47
COL4A5-205ENST00000483338 IGHV3-64A0A075B6Q5 118 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 IGHV7-4-1A0A0J9YVY3 117 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 IGLV2-23P01705 113 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 VMA21Q3ZAQ7 101 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 IGFL4Q6B9Z1 124 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 RNASE6Q93091 150 aaKnown RBP5.86□□□□□ -1.47
COL4A5-205ENST00000483338 A0A0J9YXY3 114 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 LEPROTO15243 131 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 SLC50A1Q9BRV3 221 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 DMDP11532 3685 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 PDE6HQ13956 83 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 DYNAPQ8N1N2 210 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 C20orf173Q96LM9 149 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 ZNF580Q9UK33 172 aa5.86□□□□□ -1.47
COL4A5-205ENST00000483338 DSPP15924 2871 aaKnown RBP5.86□□□□□ -1.47
COL4A5-205ENST00000483338 DEFB104AQ8WTQ1 72 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 CCL17Q92583 94 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 CCL13Q99616 98 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 CACNA1AO00555 2505 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 ZNF833PQ6ZTB9 187 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 M0R1W7 72 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
COL4A5-205ENST00000483338 ZNF876PQ49A33 203 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 LINC00474Q9P2X8 69 aa5.85□□□□□ -1.47
COL4A5-205ENST00000483338 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 ADARB2-AS1A8MUL3 147 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 SPANXN1Q5VSR9 72 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 LYPD5Q6UWN5 251 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 SLC25A15Q9Y619 301 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 TLN1Q9Y490 2541 aaKnown RBP5.84□□□□□ -1.47
COL4A5-205ENST00000483338 SRRM5B3KS81 715 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 FDCSPQ8NFU4 85 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 ZZEF1O43149 2961 aa5.84□□□□□ -1.47
COL4A5-205ENST00000483338 A0A0J9YX75 114 aa5.84□□□□□ -1.48
COL4A5-205ENST00000483338 Q6JHZ5 121 aa5.84□□□□□ -1.48
COL4A5-205ENST00000483338 TMEM61Q8N0U2 210 aa5.84□□□□□ -1.48
COL4A5-205ENST00000483338 C20orf197Q8N268 126 aa5.84□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV4-4A0A075B6R2 117 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 SS18Q15532 418 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 H7BZZ5 65 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 LHBP01229 141 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 RNF182Q8N6D2 247 aa5.83□□□□□ -1.48
COL4A5-205ENST00000483338 I3L2K1 104 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 CCL21O00585 134 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 BAALC-AS2P0C853 105 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV1-2P23083 117 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 XCL1P47992 114 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV1-69DA0A0B4J2H0 117 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 RETNQ9HD89 108 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 RNF7Q9UBF6 113 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 UBE2D4Q9Y2X8 147 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 EPG5Q9HCE0 2579 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 S4R3C0 116 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 ZFHX3Q15911 3703 aa5.82□□□□□ -1.48
COL4A5-205ENST00000483338 KNCNA6PVL3 124 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 PRAC2D3DTV9 90 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 NXPH4O95158 308 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 INAFM2P0DMQ5 153 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 COX7A1P24310 79 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 IGFL2Q6UWQ7 119 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 NUP37Q8NFH4 326 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 GHRHP01286 108 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 RPL27AP46776 148 aaKnown RBP5.81□□□□□ -1.48
COL4A5-205ENST00000483338 HILS1P60008 231 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 ZFYVE26Q68DK2 2539 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 IGHG2P01859 326 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 TMEM141Q96I45 108 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 Q96MF0 132 aa5.81□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV3-35A0A0C4DH35 117 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 FANCD2OSQ96PS1 177 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 OPRPNQ99935 248 aaPredicted RBP5.8□□□□□ -1.48
COL4A5-205ENST00000483338 SPRR3Q9UBC9 169 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RBMY1BA6NDE4 496 aaKnown RBP5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RBMY1EA6NEQ0 496 aaKnown RBP5.8□□□□□ -1.48
COL4A5-205ENST00000483338 COX7A2LO14548 114 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RBMY1DP0C7P1 496 aaKnown RBP5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RBMY1A1P0DJD3 496 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms