RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 C3orf84H3BNL1 204 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 H7C1H1 209 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 M0QY20 66 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 PPBPP02775 128 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 DEFB130BP0DP73 79 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 DEFB130AP0DP74 79 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 RAB4AP20338 218 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 PTTG1IPP53801 180 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 CEMP1Q6PRD7 247 aaPredicted RBP3.19□□□□□ -1.9
HDAC9-224ENST00000483142 AMN1Q8IY45 258 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 C14orf178Q8N769 122 aaPredicted RBP3.19□□□□□ -1.9
HDAC9-224ENST00000483142 PHLDA1Q8WV24 401 aaPredicted RBP3.19□□□□□ -1.9
HDAC9-224ENST00000483142 DNAJC30Q96LL9 226 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 TPPP3Q9BW30 176 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 GNB1LQ9BYB4 327 aa3.19□□□□□ -1.9
HDAC9-224ENST00000483142 PLECQ15149 4684 aaKnown RBP3.19□□□□□ -1.9
HDAC9-224ENST00000483142 NBEAL2Q6ZNJ1 2754 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 A0A087WWL8 130 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 A0A096LPF7 62 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 TGIF2-C20orf24A0A0A6YYL0 155 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 MUC21A0A0G2JKD1 596 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 MUC21A0A140T8X8 626 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 PPP1R17O96001 155 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 SMIM17P0DL12 118 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 UBE2D3P61077 147 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 UBE2D2P62837 147 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 TWIST1Q15672 202 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 ZNF56Q15929 161 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 MRPL51Q4U2R6 128 aaKnown RBP3.18□□□□□ -1.9
HDAC9-224ENST00000483142 FAM74A4Q5TZK3 123 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 TMEM88Q6PEY1 159 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 Q6ZSN1 163 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 SLC25A29Q8N8R3 303 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 NRACQ8N912 160 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 NEXN-AS1Q8NBZ9 246 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 PRADC1Q9BSG0 188 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 APLNQ9ULZ1 77 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 ICOSQ9Y6W8 199 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 RYR2Q92736 4967 aa3.18□□□□□ -1.9
HDAC9-224ENST00000483142 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 TRBV27A0A0K0K1C4 114 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 COLCA2A8K830 154 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 F5H768 121 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 NPYP01303 97 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 MGPP08493 103 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 RPS10P46783 165 aaKnown RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 CAMPP49913 170 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 POLR2KP53803 58 aaKnown RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 RPL36AP83881 106 aaKnown RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 ORMDL3Q8N138 153 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 RPL36ALQ969Q0 106 aaKnown RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 C20orf78Q9BR46 151 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 SMIM2Q9BVW6 85 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 NIT2Q9NQR4 276 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 HHLA3Q9XRX5 114 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 KLK5Q9Y337 293 aaPredicted RBP3.17□□□□□ -1.9
HDAC9-224ENST00000483142 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
HDAC9-224ENST00000483142 IGLV2-18A0A075B6J9 118 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 TRAV26-2A0A0B4J265 109 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 LOC100131303A0A0U1RQF7 123 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 LINC01546A6NGU7 62 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 B5MCH6 92 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 D6R8Y8 96 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 K7EMI3 77 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 PAX4O43316 350 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 SCO1O75880 301 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 GAS8-AS1O95177 125 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 NCR2O95944 276 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 RAB5AP20339 215 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 SRIP30626 198 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 SUMO2P61956 95 aaKnown RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 IQCJQ1A5X6 159 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 TMEM97Q5BJF2 176 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 CASC10Q5T4H9 136 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 DAZ4Q86SG3 579 aaKnown RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 ALKBH7Q9BT30 221 aaPredicted RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 TMEM70Q9BUB7 260 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 GTSF1LQ9H1H1 148 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 DAZ3Q9NR90 486 aaKnown RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 MRPS16Q9Y3D3 137 aaKnown RBP3.16□□□□□ -1.9
HDAC9-224ENST00000483142 DNAH1Q9P2D7 4330 aa3.16□□□□□ -1.9
HDAC9-224ENST00000483142 SDHAF1A6NFY7 115 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 TCAPO15273 167 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 TNFRSF6BO95407 300 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 APCSP02743 223 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 P0DMU3 169 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 FAM231AP0DMU4 169 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 FAM231CP0DMU5 169 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 HTN3P15516 51 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 OR10J3Q5JRS4 329 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 LELP1Q5T871 98 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms