RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 GAS8-AS1O95177 125 aa13.92□□□□□ -0.18
TRAPPC12-220ENST00000482645 CKS2P33552 79 aa13.92□□□□□ -0.18
TRAPPC12-220ENST00000482645 SLC25A29Q8N8R3 303 aa13.91□□□□□ -0.18
TRAPPC12-220ENST00000482645 APLNQ9ULZ1 77 aa13.91□□□□□ -0.18
TRAPPC12-220ENST00000482645 ORMDL3Q8N138 153 aa13.9□□□□□ -0.18
TRAPPC12-220ENST00000482645 C15orf53Q8NAA6 179 aa13.9□□□□□ -0.18
TRAPPC12-220ENST00000482645 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 K7EQD1 137 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 P0DMU3 169 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 FAM231AP0DMU4 169 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 FAM231CP0DMU5 169 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 GYPEP15421 78 aa13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 RPL39LQ96EH5 51 aaKnown RBP13.9□□□□□ -0.19
TRAPPC12-220ENST00000482645 H7C1H1 209 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 M0QY20 66 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 SRIP30626 198 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 TCTAP57738 103 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 RHOHQ15669 191 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 PRELID3AQ96N28 172 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 PRADC1Q9BSG0 188 aa13.89□□□□□ -0.19
TRAPPC12-220ENST00000482645 A0A096LPF7 62 aa13.88□□□□□ -0.19
TRAPPC12-220ENST00000482645 TRBV6-4A0A1B0GX49 114 aa13.88□□□□□ -0.19
TRAPPC12-220ENST00000482645 PPBPP02775 128 aa13.88□□□□□ -0.19
TRAPPC12-220ENST00000482645 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
TRAPPC12-220ENST00000482645 H3BNG1 76 aa13.87□□□□□ -0.19
TRAPPC12-220ENST00000482645 OR10J3Q5JRS4 329 aa13.87□□□□□ -0.19
TRAPPC12-220ENST00000482645 PHOX2AO14813 284 aa13.86□□□□□ -0.19
TRAPPC12-220ENST00000482645 NPYP01303 97 aa13.86□□□□□ -0.19
TRAPPC12-220ENST00000482645 NRACQ8N912 160 aa13.86□□□□□ -0.19
TRAPPC12-220ENST00000482645 ALKBH7Q9BT30 221 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-220ENST00000482645 TNFRSF6BO95407 300 aa13.85□□□□□ -0.19
TRAPPC12-220ENST00000482645 Q9UF83 564 aa13.85□□□□□ -0.19
TRAPPC12-220ENST00000482645 GAGE12JA6NER3 117 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 C1orf196B1AJZ1 125 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 GAGE1Q13065 139 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 GAGE4Q13068 117 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 GAGE5Q13069 117 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 MRPL23Q16540 153 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 GAGE13Q4V321 117 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 NEXN-AS1Q8NBZ9 246 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 NIT2Q9NQR4 276 aa13.84□□□□□ -0.19
TRAPPC12-220ENST00000482645 TRBV10-1A0A0K0K1A3 114 aa13.83□□□□□ -0.2
TRAPPC12-220ENST00000482645 LAMTOR2Q9Y2Q5 125 aa13.83□□□□□ -0.2
TRAPPC12-220ENST00000482645 PPP1R17O96001 155 aa13.82□□□□□ -0.2
TRAPPC12-220ENST00000482645 TNFRSF18Q9Y5U5 241 aa13.82□□□□□ -0.2
TRAPPC12-220ENST00000482645 RPL36AP83881 106 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 IQCJQ1A5X6 159 aa13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 UBE2DNLQ8IWF7 75 aa13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 RPL36ALQ969Q0 106 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 MAP1LC3AQ9H492 121 aa13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 ST20Q9HBF5 79 aa13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 ALMS1Q8TCU4 4167 aa13.81□□□□□ -0.2
TRAPPC12-220ENST00000482645 LOC389332A0A1B0GUA5 103 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 LY6G6CO95867 125 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 NEGR1Q7Z3B1 354 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 ZNRF2Q8NHG8 242 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BKO60814 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BJP06899 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BOP23527 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BBP33778 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BDP58876 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 SUMO2P61956 95 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BCP62807 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST2H2BEQ16778 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 C18orf32Q8TCD1 76 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BHQ93079 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BNQ99877 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 HIST1H2BMQ99879 126 aa13.8□□□□□ -0.2
TRAPPC12-220ENST00000482645 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 TRBV6-5A0A0K0K1A5 114 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 SDHAF1A6NFY7 115 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 CCL18P55774 89 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 RAB5BP61020 215 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 C20orf78Q9BR46 151 aa13.79□□□□□ -0.2
TRAPPC12-220ENST00000482645 ESRGQ1W209 222 aa13.78□□□□□ -0.2
TRAPPC12-220ENST00000482645 LINC00476Q8WZB0 136 aa13.78□□□□□ -0.2
TRAPPC12-220ENST00000482645 IGHV3-38A0A0C4DH36 116 aa13.77□□□□□ -0.21
TRAPPC12-220ENST00000482645 TMEM70Q9BUB7 260 aa13.77□□□□□ -0.21
TRAPPC12-220ENST00000482645 SMIM2Q9BVW6 85 aa13.77□□□□□ -0.21
TRAPPC12-220ENST00000482645 DNAH1Q9P2D7 4330 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 LINC00694P0DN24 101 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 UBE2D3P61077 147 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 UBE2D2P62837 147 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 ATP6V0E2Q8NHE4 81 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
TRAPPC12-220ENST00000482645 LGALS9CQ6DKI2 356 aa13.75□□□□□ -0.21
TRAPPC12-220ENST00000482645 SH2D6Q7Z4S9 175 aa13.75□□□□□ -0.21
TRAPPC12-220ENST00000482645 LINC00588Q9Y4M8 146 aa13.75□□□□□ -0.21
TRAPPC12-220ENST00000482645 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
TRAPPC12-220ENST00000482645 PMCHP20382 165 aa13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 IFI27P40305 119 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 LYPD5Q6UWN5 251 aa13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 BAGE3Q86Y29 109 aa13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 KMT2CQ8NEZ4 4911 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 POLR2KP53803 58 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 PRSS3P2Q8NHM4 247 aa13.74□□□□□ -0.21
TRAPPC12-220ENST00000482645 SACSQ9NZJ4 4579 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms