RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 Q6ZS46 218 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 C15orf53Q8NAA6 179 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 EDA2RQ9HAV5 297 aa8.63□□□□□ -1.03
SMPD4-218ENST00000482171 TRBV6-1A0A0K0K1D8 114 aa8.63□□□□□ -1.03
SMPD4-218ENST00000482171 KRTAP10-9P60411 292 aa8.63□□□□□ -1.03
SMPD4-218ENST00000482171 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
SMPD4-218ENST00000482171 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
SMPD4-218ENST00000482171 RPL36AP83881 106 aaKnown RBP8.63□□□□□ -1.03
SMPD4-218ENST00000482171 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
SMPD4-218ENST00000482171 RPL36ALQ969Q0 106 aaKnown RBP8.63□□□□□ -1.03
SMPD4-218ENST00000482171 AVPP01185 164 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 ZNF80P51504 273 aaPredicted RBP8.62□□□□□ -1.03
SMPD4-218ENST00000482171 EBI3Q14213 229 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 CFC1P0CG37 223 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 FREM2Q5SZK8 3169 aa8.62□□□□□ -1.03
SMPD4-218ENST00000482171 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
SMPD4-218ENST00000482171 C3orf56Q8N813 242 aa8.61□□□□□ -1.03
SMPD4-218ENST00000482171 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
SMPD4-218ENST00000482171 MYCNOSP40205 109 aa8.61□□□□□ -1.03
SMPD4-218ENST00000482171 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
SMPD4-218ENST00000482171 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 ZNF493Q6ZR52 646 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
SMPD4-218ENST00000482171 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 A4D1N5 150 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 ANKRD29Q8N6D5 301 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 MT-ATP8P03928 68 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 IGF1P05019 195 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 MORN3Q6PF18 240 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-218ENST00000482171 TMEM61Q8N0U2 210 aa8.6□□□□□ -1.03
SMPD4-218ENST00000482171 E9PLD3 99 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 RNF183Q96D59 192 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 MRPL53Q96EL3 112 aaKnown RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 CRIP1P50238 77 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
SMPD4-218ENST00000482171 CITED2Q99967 270 aaPredicted RBP8.59□□□□□ -1.03
SMPD4-218ENST00000482171 PRSS47A8MTI9 375 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 Q8N6K4 173 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 MAPKAPK5-AS1Q8N8E1 139 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 C11orf68Q9H3H3 251 aaKnown RBP8.58□□□□□ -1.04
SMPD4-218ENST00000482171 LINC00158P58513 81 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 SRSF2Q01130 221 aaKnown RBP8.58□□□□□ -1.04
SMPD4-218ENST00000482171 ZFP2Q6ZN57 461 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 LENEPQ9Y5L5 61 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 BOD1L1Q8NFC6 3051 aa8.58□□□□□ -1.04
SMPD4-218ENST00000482171 DNAJC9-AS1A6NH13 148 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 DEFB121Q5J5C9 76 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
SMPD4-218ENST00000482171 RS1O15537 224 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 RPL39P62891 51 aaKnown RBP8.57□□□□□ -1.04
SMPD4-218ENST00000482171 CITED1Q99966 193 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 ZFAND3Q9H8U3 227 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 JPT2Q9H910 190 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 IGHG4P01861 327 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 Q6ZUT4 128 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
SMPD4-218ENST00000482171 INSL3P51460 131 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 Q8N1Y9 231 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 A0A096LPF7 62 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 CRPP02741 224 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
SMPD4-218ENST00000482171 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 RBMY1BA6NDE4 496 aaKnown RBP8.55□□□□□ -1.04
SMPD4-218ENST00000482171 RBMY1EA6NEQ0 496 aaKnown RBP8.55□□□□□ -1.04
SMPD4-218ENST00000482171 K7EMT4 169 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 PAX4O43316 350 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 RBMY1DP0C7P1 496 aaKnown RBP8.55□□□□□ -1.04
SMPD4-218ENST00000482171 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
SMPD4-218ENST00000482171 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
SMPD4-218ENST00000482171 U3KQE9 123 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 CFAP46Q8IYW2 2715 aa8.55□□□□□ -1.04
SMPD4-218ENST00000482171 I3L3M4 83 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 RHODO00212 210 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 Q6YL49 198 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 TCL1BO95988 128 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 IGLV2-11P01706 119 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
SMPD4-218ENST00000482171 FRYQ5TBA9 3013 aa8.53□□□□□ -1.04
SMPD4-218ENST00000482171 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms