RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 SUMO4Q6EEV6 95 aa5.81□□□□□ -1.48
SYNE1-225ENST00000481502 SLC25A29Q8N8R3 303 aa5.81□□□□□ -1.48
SYNE1-225ENST00000481502 C15orf53Q8NAA6 179 aa5.81□□□□□ -1.48
SYNE1-225ENST00000481502 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
SYNE1-225ENST00000481502 ALKBH7Q9BT30 221 aaPredicted RBP5.81□□□□□ -1.48
SYNE1-225ENST00000481502 TRBV27A0A0K0K1C4 114 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 LINC01549A6NIU2 74 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 D6R8Y8 96 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 F5H768 121 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 PAX4O43316 350 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 G0S2P27469 103 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
SYNE1-225ENST00000481502 TIRAPP58753 221 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 NANOS2P60321 138 aaKnown RBP5.8□□□□□ -1.48
SYNE1-225ENST00000481502 OR10J3Q5JRS4 329 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 Q6ZTC4 211 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 DAZ4Q86SG3 579 aaKnown RBP5.8□□□□□ -1.48
SYNE1-225ENST00000481502 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 ST20Q9HBF5 79 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 DAZ3Q9NR90 486 aaKnown RBP5.8□□□□□ -1.48
SYNE1-225ENST00000481502 TNFRSF18Q9Y5U5 241 aa5.8□□□□□ -1.48
SYNE1-225ENST00000481502 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 NUPR2A6NF83 97 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 C1orf196B1AJZ1 125 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 VCYO14598 125 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 NCR2O95944 276 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 TRGC2P03986 189 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 LINC00694P0DN24 101 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 HOXA5P20719 270 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 RAB5BP61020 215 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 SUMO2P61956 95 aaKnown RBP5.79□□□□□ -1.48
SYNE1-225ENST00000481502 Q0VG73 95 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 NRACQ8N912 160 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 WWC2-AS2Q96NR7 200 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
SYNE1-225ENST00000481502 KLK5Q9Y337 293 aaPredicted RBP5.79□□□□□ -1.48
SYNE1-225ENST00000481502 ICOSQ9Y6W8 199 aa5.79□□□□□ -1.48
SYNE1-225ENST00000481502 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 PMCHP20382 165 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 UBE2D3P61077 147 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 UBE2D2P62837 147 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 CEMP1Q6PRD7 247 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-225ENST00000481502 Q6ZSN1 163 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 NEXN-AS1Q8NBZ9 246 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 PHLDA1Q8WV24 401 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-225ENST00000481502 TMEM70Q9BUB7 260 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 GTSF1LQ9H1H1 148 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 MAP1LC3AQ9H492 121 aa5.78□□□□□ -1.48
SYNE1-225ENST00000481502 PRKDCP78527 4128 aaKnown RBP5.77□□□□□ -1.49
SYNE1-225ENST00000481502 SDHAF1A6NFY7 115 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 I3L3M4 83 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 GYPEP15421 78 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 SRIP30626 198 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 NEGR1Q7Z3B1 354 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 Q8N8P6 123 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 ATP6V0E2Q8NHE4 81 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 KIR2DL4Q99706 377 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 DNAH9Q9NYC9 4486 aa5.77□□□□□ -1.49
SYNE1-225ENST00000481502 TRAV26-2A0A0B4J265 109 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 C3orf84H3BNL1 204 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 H7C423 109 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 NPYP01303 97 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 PKIAP61925 76 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 SMAGPQ0VAQ4 97 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 KIAA1644Q3SXP7 199 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 ORMDL2Q53FV1 153 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 COA6Q5JTJ3 125 aaKnown RBP5.76□□□□□ -1.49
SYNE1-225ENST00000481502 C18orf32Q8TCD1 76 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 CHCHD1Q96BP2 118 aaKnown RBP5.76□□□□□ -1.49
SYNE1-225ENST00000481502 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
SYNE1-225ENST00000481502 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
SYNE1-225ENST00000481502 IGLV2-18A0A075B6J9 118 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 A0A096LPF7 62 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BKO60814 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BJP06899 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 LINC00614P0C842 121 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HTN3P15516 51 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BOP23527 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BBP33778 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BDP58876 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BCP62807 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 COTL1Q14019 142 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST2H2BEQ16778 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.75□□□□□ -1.49
SYNE1-225ENST00000481502 PRSS3P2Q8NHM4 247 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 MUC7Q8TAX7 377 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BHQ93079 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BNQ99877 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 HIST1H2BMQ99879 126 aa5.75□□□□□ -1.49
SYNE1-225ENST00000481502 GAGE12JA6NER3 117 aa5.74□□□□□ -1.49
SYNE1-225ENST00000481502 SMKR1H3BMG3 65 aa5.74□□□□□ -1.49
SYNE1-225ENST00000481502 K7EP13 123 aa5.74□□□□□ -1.49
SYNE1-225ENST00000481502 NPSP0C0P6 89 aa5.74□□□□□ -1.49
SYNE1-225ENST00000481502 ESDP10768 282 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms