RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 IGHV3-73A0A0B4J1V6 119 aa11.29□□□□□ -0.6
RXRB-203ENST00000481441 APOC3P02656 99 aa11.29□□□□□ -0.6
RXRB-203ENST00000481441 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
RXRB-203ENST00000481441 COX8CQ7Z4L0 72 aa11.29□□□□□ -0.6
RXRB-203ENST00000481441 TRAV21A0A0B4J279 112 aa11.28□□□□□ -0.6
RXRB-203ENST00000481441 GCGP01275 180 aa11.28□□□□□ -0.6
RXRB-203ENST00000481441 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
RXRB-203ENST00000481441 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
RXRB-203ENST00000481441 SMUG1Q53HV7 270 aa11.28□□□□□ -0.6
RXRB-203ENST00000481441 PRR27Q6MZM9 219 aa11.28□□□□□ -0.6
RXRB-203ENST00000481441 CRIP1P50238 77 aa11.27□□□□□ -0.61
RXRB-203ENST00000481441 ISOC2Q96AB3 205 aa11.27□□□□□ -0.61
RXRB-203ENST00000481441 KCNS1Q96KK3 526 aa11.27□□□□□ -0.61
RXRB-203ENST00000481441 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.61
RXRB-203ENST00000481441 M0R036 132 aa11.26□□□□□ -0.61
RXRB-203ENST00000481441 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
RXRB-203ENST00000481441 RMI2Q96E14 147 aa11.26□□□□□ -0.61
RXRB-203ENST00000481441 LRP2P98164 4655 aa11.25□□□□□ -0.61
RXRB-203ENST00000481441 SH2D1AO60880 128 aa11.25□□□□□ -0.61
RXRB-203ENST00000481441 SVBPQ8N300 66 aa11.25□□□□□ -0.61
RXRB-203ENST00000481441 CLRN3Q8NCR9 226 aa11.25□□□□□ -0.61
RXRB-203ENST00000481441 RNASE7Q9H1E1 156 aaKnown RBP11.25□□□□□ -0.61
RXRB-203ENST00000481441 IGKV2D-24A0A075B6R9 120 aa11.24□□□□□ -0.61
RXRB-203ENST00000481441 S100A1P23297 94 aa11.24□□□□□ -0.61
RXRB-203ENST00000481441 FAM162BQ5T6X4 162 aa11.24□□□□□ -0.61
RXRB-203ENST00000481441 BIN3Q9NQY0 253 aa11.24□□□□□ -0.61
RXRB-203ENST00000481441 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
RXRB-203ENST00000481441 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
RXRB-203ENST00000481441 C9orf85Q96MD7 179 aa11.23□□□□□ -0.61
RXRB-203ENST00000481441 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 SNAPINO95295 136 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 GAGE1Q13065 139 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 GAGE4Q13068 117 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 GAGE5Q13069 117 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 FAM231DQ6ZW35 169 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 NUDT10Q8NFP7 164 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 PTH2Q96A98 100 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 NUDT11Q96G61 164 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
RXRB-203ENST00000481441 A0A087WWC5 75 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 B4DEV8 164 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 OR10G8Q8NGN5 311 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 Q9UF83 564 aa11.21□□□□□ -0.61
RXRB-203ENST00000481441 P01737 135 aa11.2□□□□□ -0.62
RXRB-203ENST00000481441 RHEBQ15382 184 aa11.2□□□□□ -0.62
RXRB-203ENST00000481441 NIT1Q86X76 327 aa11.2□□□□□ -0.62
RXRB-203ENST00000481441 C15orf54Q8N8G6 183 aa11.2□□□□□ -0.62
RXRB-203ENST00000481441 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
RXRB-203ENST00000481441 GATCO43716 136 aaKnown RBP11.19□□□□□ -0.62
RXRB-203ENST00000481441 MT-ND4LP03901 98 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 RPL19P84098 196 aaKnown RBP11.19□□□□□ -0.62
RXRB-203ENST00000481441 Q6ZRU5 148 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 V9GYV3 84 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 TNXBP22105 4242 aa11.19□□□□□ -0.62
RXRB-203ENST00000481441 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
RXRB-203ENST00000481441 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
RXRB-203ENST00000481441 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
RXRB-203ENST00000481441 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
RXRB-203ENST00000481441 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
RXRB-203ENST00000481441 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
RXRB-203ENST00000481441 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
RXRB-203ENST00000481441 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
RXRB-203ENST00000481441 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
RXRB-203ENST00000481441 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
RXRB-203ENST00000481441 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
RXRB-203ENST00000481441 CTDSP1Q9GZU7 261 aa11.16□□□□□ -0.62
RXRB-203ENST00000481441 GZMBP10144 247 aa11.15□□□□□ -0.62
RXRB-203ENST00000481441 CT83Q5H943 113 aa11.15□□□□□ -0.62
RXRB-203ENST00000481441 GRIFINA4D1Z8 144 aa11.14□□□□□ -0.63
RXRB-203ENST00000481441 A8MWV9 139 aa11.14□□□□□ -0.63
RXRB-203ENST00000481441 UFSP1Q6NVU6 142 aa11.14□□□□□ -0.63
RXRB-203ENST00000481441 C14orf178Q8N769 122 aaPredicted RBP11.14□□□□□ -0.63
RXRB-203ENST00000481441 CHCHD7Q9BUK0 85 aa11.14□□□□□ -0.63
RXRB-203ENST00000481441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
RXRB-203ENST00000481441 SCO1O75880 301 aa11.13□□□□□ -0.63
RXRB-203ENST00000481441 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
RXRB-203ENST00000481441 ELOBQ15370 118 aa11.13□□□□□ -0.63
RXRB-203ENST00000481441 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
RXRB-203ENST00000481441 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
RXRB-203ENST00000481441 A0A087WX48 190 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 A8MWL6 223 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 PANO1I0J062 215 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 ASIPP42127 132 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 Q0VG73 95 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 TSKUQ8WUA8 353 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 GTSF1Q8WW33 167 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 JPT2Q9H910 190 aa11.12□□□□□ -0.63
RXRB-203ENST00000481441 CXCL1P09341 107 aa11.11□□□□□ -0.63
RXRB-203ENST00000481441 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
RXRB-203ENST00000481441 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms