RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 S100A9P06702 114 aaKnown RBP10.03□□□□□ -0.8
LIMS3-203ENST00000480744 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 TEX261Q6UWH6 196 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 BAGE2Q86Y30 109 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 Q8N976 141 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 OR10AG1Q8NH19 301 aa10.03□□□□□ -0.8
LIMS3-203ENST00000480744 MUC21A0A0G2JKD1 596 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 MUC21A0A140T8X8 626 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 PDE6DO43924 150 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
LIMS3-203ENST00000480744 RAB4BP61018 213 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 SSTP61278 116 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 Q6ZSA8 131 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.81
LIMS3-203ENST00000480744 F5H697 171 aa10.01□□□□□ -0.81
LIMS3-203ENST00000480744 TRBV6-8A0A0A6YYG3 113 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 J3QL48 77 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 CRPP02741 224 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 Q0VG73 95 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 C15orf54Q8N8G6 183 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 MED9Q9NWA0 146 aa10□□□□□ -0.81
LIMS3-203ENST00000480744 CXCL1P09341 107 aa9.99□□□□□ -0.81
LIMS3-203ENST00000480744 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
LIMS3-203ENST00000480744 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
LIMS3-203ENST00000480744 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.99□□□□□ -0.81
LIMS3-203ENST00000480744 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
LIMS3-203ENST00000480744 CHCHD5Q9BSY4 110 aa9.99□□□□□ -0.81
LIMS3-203ENST00000480744 C1orf43Q9BWL3 253 aa9.99□□□□□ -0.81
LIMS3-203ENST00000480744 SNAI2O43623 268 aa9.98□□□□□ -0.81
LIMS3-203ENST00000480744 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
LIMS3-203ENST00000480744 GNG4P50150 75 aa9.98□□□□□ -0.81
LIMS3-203ENST00000480744 MPV17L2Q567V2 206 aa9.98□□□□□ -0.81
LIMS3-203ENST00000480744 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
LIMS3-203ENST00000480744 C19orf71A6NCJ1 209 aa9.97□□□□□ -0.81
LIMS3-203ENST00000480744 K7EN84 100 aa9.97□□□□□ -0.81
LIMS3-203ENST00000480744 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
LIMS3-203ENST00000480744 SMIM17P0DL12 118 aa9.97□□□□□ -0.81
LIMS3-203ENST00000480744 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
LIMS3-203ENST00000480744 TMEM250H0YL14 139 aa9.96□□□□□ -0.82
LIMS3-203ENST00000480744 HLA-DQA1P01909 254 aa9.96□□□□□ -0.82
LIMS3-203ENST00000480744 C14orf177Q52M58 125 aa9.96□□□□□ -0.82
LIMS3-203ENST00000480744 AP1S3Q96PC3 154 aa9.96□□□□□ -0.82
LIMS3-203ENST00000480744 TPPP3Q9BW30 176 aa9.96□□□□□ -0.82
LIMS3-203ENST00000480744 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
LIMS3-203ENST00000480744 C9JQL5 133 aa9.95□□□□□ -0.82
LIMS3-203ENST00000480744 PKIAP61925 76 aa9.95□□□□□ -0.82
LIMS3-203ENST00000480744 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
LIMS3-203ENST00000480744 SMIM12Q96EX1 92 aa9.95□□□□□ -0.82
LIMS3-203ENST00000480744 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
LIMS3-203ENST00000480744 EIF5A2Q9GZV4 153 aaKnown RBP9.95□□□□□ -0.82
LIMS3-203ENST00000480744 MGPP08493 103 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 SRP19P09132 144 aaKnown RBP9.94□□□□□ -0.82
LIMS3-203ENST00000480744 GZMBP10144 247 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 GAGE6Q13070 117 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 TMEM97Q5BJF2 176 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 DEFB104AQ8WTQ1 72 aa9.94□□□□□ -0.82
LIMS3-203ENST00000480744 USP17L23D6RBM5 183 aa9.93□□□□□ -0.82
LIMS3-203ENST00000480744 CEBPGP53567 150 aa9.93□□□□□ -0.82
LIMS3-203ENST00000480744 NTM-AS1Q6ZSK4 140 aa9.93□□□□□ -0.82
LIMS3-203ENST00000480744 OCC1Q8TAD7 63 aa9.93□□□□□ -0.82
LIMS3-203ENST00000480744 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
LIMS3-203ENST00000480744 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
LIMS3-203ENST00000480744 IFITM2Q01629 132 aa9.92□□□□□ -0.82
LIMS3-203ENST00000480744 MIAQ16674 131 aa9.92□□□□□ -0.82
LIMS3-203ENST00000480744 OR2D3Q8NGH3 330 aa9.92□□□□□ -0.82
LIMS3-203ENST00000480744 CIRBP-AS1Q8TBR5 109 aa9.92□□□□□ -0.82
LIMS3-203ENST00000480744 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
LIMS3-203ENST00000480744 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
LIMS3-203ENST00000480744 RBX1P62877 108 aa9.91□□□□□ -0.82
LIMS3-203ENST00000480744 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
LIMS3-203ENST00000480744 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
LIMS3-203ENST00000480744 IGLC6P0CF74 106 aa9.9□□□□□ -0.82
LIMS3-203ENST00000480744 RPS20P60866 119 aaKnown RBP9.9□□□□□ -0.82
LIMS3-203ENST00000480744 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
LIMS3-203ENST00000480744 NUDT10Q8NFP7 164 aa9.9□□□□□ -0.82
LIMS3-203ENST00000480744 NUDT11Q96G61 164 aa9.9□□□□□ -0.82
LIMS3-203ENST00000480744 SMIM7Q9BQ49 75 aa9.9□□□□□ -0.82
LIMS3-203ENST00000480744 IGHV1-24A0A0C4DH33 117 aa9.89□□□□□ -0.83
LIMS3-203ENST00000480744 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
LIMS3-203ENST00000480744 H7C1H1 209 aa9.89□□□□□ -0.83
LIMS3-203ENST00000480744 P01737 135 aa9.89□□□□□ -0.83
LIMS3-203ENST00000480744 CACNG7P62955 275 aa9.89□□□□□ -0.83
LIMS3-203ENST00000480744 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
LIMS3-203ENST00000480744 M0QY20 66 aa9.88□□□□□ -0.83
LIMS3-203ENST00000480744 PRSS1P07477 247 aa9.88□□□□□ -0.83
LIMS3-203ENST00000480744 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
LIMS3-203ENST00000480744 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
LIMS3-203ENST00000480744 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
LIMS3-203ENST00000480744 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
LIMS3-203ENST00000480744 LINC01551Q86U37 167 aa9.87□□□□□ -0.83
LIMS3-203ENST00000480744 RPP21Q9H633 154 aaKnown RBP9.87□□□□□ -0.83
LIMS3-203ENST00000480744 BIN3Q9NQY0 253 aa9.87□□□□□ -0.83
LIMS3-203ENST00000480744 XKRY2A2RUG3 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms