RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 FAM231AP0DMU4 169 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 FAM231CP0DMU5 169 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 CTAG1AP78358 180 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 ZNF56Q15929 161 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 SUMO4Q6EEV6 95 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 Q6ZN92 141 aa3.01□□□□□ -1.93
USP25-208ENST00000478932 TENM2Q9NT68 2774 aa3□□□□□ -1.93
USP25-208ENST00000478932 C20orf202A1L168 122 aa3□□□□□ -1.93
USP25-208ENST00000478932 SDHAF1A6NFY7 115 aa3□□□□□ -1.93
USP25-208ENST00000478932 A8MTW9 85 aa3□□□□□ -1.93
USP25-208ENST00000478932 M0QY20 66 aa3□□□□□ -1.93
USP25-208ENST00000478932 RPL35AP18077 110 aaKnown RBP3□□□□□ -1.93
USP25-208ENST00000478932 NUTF2P61970 127 aaKnown RBP3□□□□□ -1.93
USP25-208ENST00000478932 Q6ZSN1 163 aa3□□□□□ -1.93
USP25-208ENST00000478932 C1orf158Q8N1D5 194 aa3□□□□□ -1.93
USP25-208ENST00000478932 DEFB125Q8N687 156 aa3□□□□□ -1.93
USP25-208ENST00000478932 C20orf78Q9BR46 151 aa3□□□□□ -1.93
USP25-208ENST00000478932 SNHG12Q9BXW3 62 aa3□□□□□ -1.93
USP25-208ENST00000478932 GOLT1BQ9Y3E0 138 aa3□□□□□ -1.93
USP25-208ENST00000478932 TRGV11A0A075B6L2 103 aa3□□□□□ -1.93
USP25-208ENST00000478932 LINC01546A6NGU7 62 aa3□□□□□ -1.93
USP25-208ENST00000478932 PRSS47A8MTI9 375 aa3□□□□□ -1.93
USP25-208ENST00000478932 EREGO14944 169 aa3□□□□□ -1.93
USP25-208ENST00000478932 GIG44P09565 113 aaPredicted RBP3□□□□□ -1.93
USP25-208ENST00000478932 BATFQ16520 125 aa3□□□□□ -1.93
USP25-208ENST00000478932 TRPT1Q86TN4 253 aaKnown RBP3□□□□□ -1.93
USP25-208ENST00000478932 NDUFA11Q86Y39 141 aa3□□□□□ -1.93
USP25-208ENST00000478932 SYT8Q8NBV8 401 aa3□□□□□ -1.93
USP25-208ENST00000478932 C19orf73Q9NVV2 129 aa3□□□□□ -1.93
USP25-208ENST00000478932 MRPL16Q9NX20 251 aaKnown RBP3□□□□□ -1.93
USP25-208ENST00000478932 HSBP1L1C9JCN9 74 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 M0R2P5 195 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 INSP01308 110 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 POLR2KP53803 58 aaKnown RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 RPL39P62891 51 aaKnown RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 MORN3Q6PF18 240 aaPredicted RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 C2orf66Q6UXQ4 117 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 C11orf72Q8NBR9 251 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 ST20Q9HBF5 79 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 UQCR10Q9UDW1 63 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 ZMAT5Q9UDW3 170 aaKnown RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 HHLA3Q9XRX5 114 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 ODF1Q14990 250 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 BEAN1Q3B7T3 259 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 ANKRD39Q53RE8 183 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 LINC00482Q8N8I6 264 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 SCGB3A1Q96QR1 104 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 KIR2DL4Q99706 377 aa2.99□□□□□ -1.93
USP25-208ENST00000478932 MRPL35Q9NZE8 188 aaKnown RBP2.99□□□□□ -1.93
USP25-208ENST00000478932 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 TRBV27A0A0K0K1C4 114 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 CYSRT1A8MQ03 144 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 M0R143 59 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 VCYO14598 125 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 PPP1R17O96001 155 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 EMP1P54849 157 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 LGALS9BQ3B8N2 356 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 ORMDL2Q53FV1 153 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 ZC2HC1BQ5TFG8 222 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 CFAP126Q5VTH2 177 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 LGALS9CQ6DKI2 356 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 ZFP2Q6ZN57 461 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 Q6ZTI0 123 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 POM121L12Q8N7R1 296 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 TTTY13Q9BZ97 58 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 IGKV2D-26A0A0A0MRZ7 120 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 A0A1B0GV90 55 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 ATP5LO75964 103 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 IGHV3-53P01767 116 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 HINT1P49773 126 aaPredicted RBP2.98□□□□□ -1.93
USP25-208ENST00000478932 HNRNPA3P51991 378 aaKnown RBP2.98□□□□□ -1.93
USP25-208ENST00000478932 ZNF415Q09FC8 603 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 ERASQ7Z444 233 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 PCP2Q8IVA1 136 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 RNASE8Q8TDE3 154 aaKnown RBP2.98□□□□□ -1.93
USP25-208ENST00000478932 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 CLUHP3Q96NS8 147 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 OPRPNQ99935 248 aaPredicted RBP2.98□□□□□ -1.93
USP25-208ENST00000478932 NOP10Q9NPE3 64 aaKnown RBP2.98□□□□□ -1.93
USP25-208ENST00000478932 TP53TG1Q9Y2A0 90 aa2.98□□□□□ -1.93
USP25-208ENST00000478932 A8MWV9 139 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 NMUP48645 174 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 MPV17L2Q567V2 206 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 SLC25A34Q6PIV7 304 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 GTSCR1Q86UQ5 136 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 CSNK1G2-AS1Q8NCQ2 148 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 ZNF479Q96JC4 524 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 IGHV3-38A0A0C4DH36 116 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 TRBV6-5A0A0K0K1A5 114 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 PRSS29PA6NIE9 313 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 TSHBP01222 138 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 UFSP1Q6NVU6 142 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 CEMP1Q6PRD7 247 aaPredicted RBP2.97□□□□□ -1.93
USP25-208ENST00000478932 CITED1Q99966 193 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 CYSLTR1Q9Y271 337 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 TNFRSF18Q9Y5U5 241 aa2.97□□□□□ -1.93
USP25-208ENST00000478932 A0A087WX48 190 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms