RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
HDAC8-217ENST00000478743 FAUP35544 74 aaKnown RBP7.07□□□□□ -1.28
HDAC8-217ENST00000478743 FLI1Q01543 452 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-217ENST00000478743 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
HDAC8-217ENST00000478743 ZFP69Q49AA0 526 aa7.07□□□□□ -1.28
HDAC8-217ENST00000478743 FAM74A1Q5RGS3 127 aa7.07□□□□□ -1.28
HDAC8-217ENST00000478743 DNLZQ5SXM8 178 aa7.07□□□□□ -1.28
HDAC8-217ENST00000478743 CARHSP1Q9Y2V2 147 aaKnown RBP7.07□□□□□ -1.28
HDAC8-217ENST00000478743 TMSB15BA0A087X1C1 80 aa7.06□□□□□ -1.28
HDAC8-217ENST00000478743 CRIP1P50238 77 aa7.06□□□□□ -1.28
HDAC8-217ENST00000478743 DEFA3P59666 94 aa7.06□□□□□ -1.28
HDAC8-217ENST00000478743 TMEM97Q5BJF2 176 aa7.06□□□□□ -1.28
HDAC8-217ENST00000478743 MLST8Q9BVC4 326 aa7.06□□□□□ -1.28
HDAC8-217ENST00000478743 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
HDAC8-217ENST00000478743 HBG1P69891 147 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 HBG2P69892 147 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 NHLH2Q02577 135 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 SYCNQ0VAF6 134 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 TOMM5Q8N4H5 51 aa7.05□□□□□ -1.28
HDAC8-217ENST00000478743 ZNF471Q9BX82 626 aaPredicted RBP7.05□□□□□ -1.28
HDAC8-217ENST00000478743 TRAV34A0A0B4J273 112 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 CFC1BP0CG36 223 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
HDAC8-217ENST00000478743 SPCS2Q15005 226 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 STX12Q86Y82 276 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 ZFP82Q8N141 532 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 WDR61Q9GZS3 305 aaKnown RBP7.04□□□□□ -1.28
HDAC8-217ENST00000478743 Q9H521 79 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 RSL24D1Q9UHA3 163 aaKnown RBP7.04□□□□□ -1.28
HDAC8-217ENST00000478743 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
HDAC8-217ENST00000478743 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
HDAC8-217ENST00000478743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-217ENST00000478743 MEF2BQ02080 365 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-217ENST00000478743 ZNF674Q2M3X9 581 aa7.03□□□□□ -1.28
HDAC8-217ENST00000478743 ARL2-SNX15V9GYD0 113 aa7.03□□□□□ -1.28
HDAC8-217ENST00000478743 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 FABP5P3A8MUU1 101 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 FAM25EA8MYX2 175 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 SH2D1AO60880 128 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 TMBIM6P55061 237 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 RAB32Q13637 225 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 FAM162BQ5T6X4 162 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-217ENST00000478743 C5orf17Q8NAS9 161 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 OR10AG1Q8NH19 301 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
HDAC8-217ENST00000478743 A0A087WXM4 84 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 SERTM2A0A1B0GWG4 89 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 TAS2R45P59539 299 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 RPL18AQ02543 176 aaKnown RBP7.01□□□□□ -1.29
HDAC8-217ENST00000478743 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 VCX3AQ9NNX9 186 aa7.01□□□□□ -1.29
HDAC8-217ENST00000478743 F5H697 171 aa7□□□□□ -1.29
HDAC8-217ENST00000478743 NDUFB6O95139 128 aa7□□□□□ -1.29
HDAC8-217ENST00000478743 XCL1P47992 114 aa7□□□□□ -1.29
HDAC8-217ENST00000478743 CAMPP49913 170 aa7□□□□□ -1.29
HDAC8-217ENST00000478743 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
HDAC8-217ENST00000478743 IGLV4-69A0A075B6H9 119 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 FGF6P10767 208 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 AP3S2P59780 193 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
HDAC8-217ENST00000478743 Q86TA4 180 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 NUP35Q8NFH5 326 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
HDAC8-217ENST00000478743 TRAV6A0A075B6T7 132 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 ARL14EPLP0DKL9 152 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-217ENST00000478743 RPL12P30050 165 aaKnown RBP6.98□□□□□ -1.29
HDAC8-217ENST00000478743 IL15RAQ13261 267 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 SAPCD1Q5SSQ6 148 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 OPRPNQ99935 248 aaPredicted RBP6.98□□□□□ -1.29
HDAC8-217ENST00000478743 KCNIP2Q9NS61 270 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
HDAC8-217ENST00000478743 APOMO95445 188 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 NKX2-5P52952 324 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-217ENST00000478743 SSTP61278 116 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 LINC01559Q495D7 138 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 PYDC2Q56P42 97 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 V9GYH0 126 aa6.97□□□□□ -1.29
HDAC8-217ENST00000478743 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.29
HDAC8-217ENST00000478743 C17orf112F2Z3M2 114 aa6.96□□□□□ -1.3
HDAC8-217ENST00000478743 K7EQM0 130 aa6.96□□□□□ -1.3
HDAC8-217ENST00000478743 UBE2L6O14933 153 aa6.96□□□□□ -1.3
HDAC8-217ENST00000478743 CCL25O15444 150 aa6.96□□□□□ -1.3
HDAC8-217ENST00000478743 BTCP35070 178 aa6.96□□□□□ -1.3
HDAC8-217ENST00000478743 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
HDAC8-217ENST00000478743 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
HDAC8-217ENST00000478743 M0QY20 66 aa6.95□□□□□ -1.3
HDAC8-217ENST00000478743 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
HDAC8-217ENST00000478743 MRPS26Q9BYN8 205 aaKnown RBP6.95□□□□□ -1.3
HDAC8-217ENST00000478743 H3BMQ9 156 aa6.94□□□□□ -1.3
HDAC8-217ENST00000478743 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms