RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RHODO00212 210 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 EVI2AP22794 236 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 RAB4BP61018 213 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 CFAP126Q5VTH2 177 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 C14orf178Q8N769 122 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-209ENST00000477554 GNB1LQ9BYB4 327 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 Q9H8V8 135 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 JPT2Q9H910 190 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
PTPN7-209ENST00000477554 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 COLCA2A8K830 154 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 ZFP2Q6ZN57 461 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 HERC2O95714 4834 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 A0A087WWL8 130 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 K7EQD1 137 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 HLA-DQA1P01909 254 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 MT-ND6P03923 174 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 CRYGDP07320 174 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
PTPN7-209ENST00000477554 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
PTPN7-209ENST00000477554 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
PTPN7-209ENST00000477554 TMEM136Q6ZRR5 245 aa12.1□□□□□ -0.47
PTPN7-209ENST00000477554 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
PTPN7-209ENST00000477554 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
PTPN7-209ENST00000477554 GYPEP15421 78 aa12.09□□□□□ -0.47
PTPN7-209ENST00000477554 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
PTPN7-209ENST00000477554 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
PTPN7-209ENST00000477554 UPK3BQ9BT76 320 aa12.09□□□□□ -0.47
PTPN7-209ENST00000477554 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
PTPN7-209ENST00000477554 MGPP08493 103 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 TNP2Q05952 138 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 Q6ZSN1 163 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 FRZBQ92765 325 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 Q9UF83 564 aa12.08□□□□□ -0.48
PTPN7-209ENST00000477554 F5H697 171 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 GATA1P15976 413 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-209ENST00000477554 RAB4AP20338 218 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 RAB5AP20339 215 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
PTPN7-209ENST00000477554 ZNF56Q15929 161 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 AMN1Q8IY45 258 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 TRAPPC1Q9Y5R8 145 aa12.07□□□□□ -0.48
PTPN7-209ENST00000477554 APCSP02743 223 aa12.06□□□□□ -0.48
PTPN7-209ENST00000477554 LINC00315P59091 139 aa12.06□□□□□ -0.48
PTPN7-209ENST00000477554 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
PTPN7-209ENST00000477554 DNAH5Q8TE73 4624 aa12.06□□□□□ -0.48
PTPN7-209ENST00000477554 SLAQ13239 276 aa12.05□□□□□ -0.48
PTPN7-209ENST00000477554 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
PTPN7-209ENST00000477554 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
PTPN7-209ENST00000477554 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
PTPN7-209ENST00000477554 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
PTPN7-209ENST00000477554 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
PTPN7-209ENST00000477554 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
PTPN7-209ENST00000477554 MRPL23Q16540 153 aaKnown RBP12.04□□□□□ -0.48
PTPN7-209ENST00000477554 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
PTPN7-209ENST00000477554 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
PTPN7-209ENST00000477554 H7C1H1 209 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 PPBPP02775 128 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 SRIP30626 198 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 CKS2P33552 79 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 SUMO4Q6EEV6 95 aa12.03□□□□□ -0.48
PTPN7-209ENST00000477554 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-209ENST00000477554 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
PTPN7-209ENST00000477554 PPP1R17O96001 155 aa12.02□□□□□ -0.49
PTPN7-209ENST00000477554 SIVA1O15304 175 aa12.01□□□□□ -0.49
PTPN7-209ENST00000477554 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
PTPN7-209ENST00000477554 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 D6R8Y8 96 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 M0QY20 66 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 TRGC2P03986 189 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 RHOHQ15669 191 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
PTPN7-209ENST00000477554 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
PTPN7-209ENST00000477554 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
PTPN7-209ENST00000477554 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
PTPN7-209ENST00000477554 RYR1P21817 5038 aa11.98□□□□□ -0.49
PTPN7-209ENST00000477554 Q6ZRN7 208 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-209ENST00000477554 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
PTPN7-209ENST00000477554 NIT2Q9NQR4 276 aa11.98□□□□□ -0.49
PTPN7-209ENST00000477554 SMKR1H3BMG3 65 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 PHOX2AO14813 284 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 NCR2O95944 276 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 Q8N3U1 123 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 HSPG2P98160 4391 aa11.97□□□□□ -0.49
PTPN7-209ENST00000477554 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTPN7-209ENST00000477554 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.49
PTPN7-209ENST00000477554 ALKBH7Q9BT30 221 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-209ENST00000477554 GAGE12JA6NER3 117 aa11.95□□□□□ -0.5
PTPN7-209ENST00000477554 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
PTPN7-209ENST00000477554 LINC00694P0DN24 101 aa11.95□□□□□ -0.5
PTPN7-209ENST00000477554 RPL36AP83881 106 aaKnown RBP11.95□□□□□ -0.5
PTPN7-209ENST00000477554 GAGE1Q13065 139 aa11.95□□□□□ -0.5
PTPN7-209ENST00000477554 GAGE4Q13068 117 aa11.95□□□□□ -0.5
PTPN7-209ENST00000477554 GAGE5Q13069 117 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms