RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 NUDT3O95989 172 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 APCSP02743 223 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 CKS2P33552 79 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 RPL36AP83881 106 aaKnown RBP11.28□□□□□ -0.6
VHL-203ENST00000477538 GAGE1Q13065 139 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 GAGE4Q13068 117 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 GAGE5Q13069 117 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 GAGE13Q4V321 117 aa11.28□□□□□ -0.6
VHL-203ENST00000477538 RPL36ALQ969Q0 106 aaKnown RBP11.28□□□□□ -0.6
VHL-203ENST00000477538 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
VHL-203ENST00000477538 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
VHL-203ENST00000477538 D6R8Y8 96 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 C3orf84H3BNL1 204 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 PPBPP02775 128 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
VHL-203ENST00000477538 OR10J3Q5JRS4 329 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 ZNRF2Q8NHG8 242 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.61
VHL-203ENST00000477538 TRBV7-3A0A075B6L6 115 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 A0A096LPF7 62 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 SRIP30626 198 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 RPS10P46783 165 aaKnown RBP11.26□□□□□ -0.61
VHL-203ENST00000477538 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 TNFRSF18Q9Y5U5 241 aa11.26□□□□□ -0.61
VHL-203ENST00000477538 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 PPP1R17O96001 155 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 FABP9Q0Z7S8 132 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 NRACQ8N912 160 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 APLNQ9ULZ1 77 aa11.25□□□□□ -0.61
VHL-203ENST00000477538 RAB5AP20339 215 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 TCTAP57738 103 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 UBE2D3P61077 147 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 UBE2D2P62837 147 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 SH2D6Q7Z4S9 175 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 TENM2Q9NT68 2774 aa11.24□□□□□ -0.61
VHL-203ENST00000477538 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
VHL-203ENST00000477538 NPYP01303 97 aa11.23□□□□□ -0.61
VHL-203ENST00000477538 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
VHL-203ENST00000477538 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
VHL-203ENST00000477538 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
VHL-203ENST00000477538 PHOX2AO14813 284 aa11.22□□□□□ -0.61
VHL-203ENST00000477538 TNFRSF6BO95407 300 aa11.22□□□□□ -0.61
VHL-203ENST00000477538 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
VHL-203ENST00000477538 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
VHL-203ENST00000477538 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
VHL-203ENST00000477538 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
VHL-203ENST00000477538 DAZ4Q86SG3 579 aaKnown RBP11.2□□□□□ -0.62
VHL-203ENST00000477538 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.2□□□□□ -0.62
VHL-203ENST00000477538 C20orf78Q9BR46 151 aa11.2□□□□□ -0.62
VHL-203ENST00000477538 ALKBH7Q9BT30 221 aaPredicted RBP11.2□□□□□ -0.62
VHL-203ENST00000477538 DAZ3Q9NR90 486 aaKnown RBP11.2□□□□□ -0.62
VHL-203ENST00000477538 TRGC2P03986 189 aa11.19□□□□□ -0.62
VHL-203ENST00000477538 TMEM70Q9BUB7 260 aa11.19□□□□□ -0.62
VHL-203ENST00000477538 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
VHL-203ENST00000477538 STARD9Q9P2P6 4700 aa11.19□□□□□ -0.62
VHL-203ENST00000477538 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
VHL-203ENST00000477538 POLR2KP53803 58 aaKnown RBP11.18□□□□□ -0.62
VHL-203ENST00000477538 LYPD5Q6UWN5 251 aa11.18□□□□□ -0.62
VHL-203ENST00000477538 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
VHL-203ENST00000477538 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
VHL-203ENST00000477538 PMCHP20382 165 aa11.17□□□□□ -0.62
VHL-203ENST00000477538 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
VHL-203ENST00000477538 ESRGQ1W209 222 aa11.17□□□□□ -0.62
VHL-203ENST00000477538 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 I3L3M4 83 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 VCYO14598 125 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 CCL18P55774 89 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 TIRAPP58753 221 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 COTL1Q14019 142 aa11.16□□□□□ -0.62
VHL-203ENST00000477538 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
VHL-203ENST00000477538 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
VHL-203ENST00000477538 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.62
VHL-203ENST00000477538 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.62
VHL-203ENST00000477538 LELP1Q5T871 98 aa11.14□□□□□ -0.63
VHL-203ENST00000477538 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
VHL-203ENST00000477538 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
VHL-203ENST00000477538 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
VHL-203ENST00000477538 LINC00588Q9Y4M8 146 aa11.14□□□□□ -0.63
VHL-203ENST00000477538 TRBV6-8A0A0A6YYG3 113 aa11.13□□□□□ -0.63
VHL-203ENST00000477538 TSHBP01222 138 aa11.13□□□□□ -0.63
VHL-203ENST00000477538 Q8N8P6 123 aa11.13□□□□□ -0.63
VHL-203ENST00000477538 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
VHL-203ENST00000477538 MRPS16Q9Y3D3 137 aaKnown RBP11.13□□□□□ -0.63
VHL-203ENST00000477538 IGLV2-18A0A075B6J9 118 aa11.12□□□□□ -0.63
VHL-203ENST00000477538 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
VHL-203ENST00000477538 FCER1GP30273 86 aa11.12□□□□□ -0.63
VHL-203ENST00000477538 IFI27P40305 119 aaPredicted RBP11.12□□□□□ -0.63
VHL-203ENST00000477538 AMTP48728 403 aa11.12□□□□□ -0.63
VHL-203ENST00000477538 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
VHL-203ENST00000477538 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
VHL-203ENST00000477538 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
VHL-203ENST00000477538 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
VHL-203ENST00000477538 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms