RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 A0A1W2PPM0 123 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 K7EP34 96 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 PMVKQ15126 192 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 ZNF56Q15929 161 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 DEFB136Q30KP8 78 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 C4orf3Q8WVX3 66 aa12.14□□□□□ -0.47
TMEM53-208ENST00000476724 SLURP1P55000 103 aa12.13□□□□□ -0.47
TMEM53-208ENST00000476724 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
TMEM53-208ENST00000476724 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
TMEM53-208ENST00000476724 RHOHQ15669 191 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 ZNF876PQ49A33 203 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 TSHBP01222 138 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 SAMD5Q5TGI4 173 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
TMEM53-208ENST00000476724 AGRNO00468 2067 aa12.11□□□□□ -0.47
TMEM53-208ENST00000476724 RNASE1P07998 156 aaKnown RBP12.11□□□□□ -0.47
TMEM53-208ENST00000476724 FABP2P12104 132 aa12.11□□□□□ -0.47
TMEM53-208ENST00000476724 DEFB131AP59861 70 aa12.11□□□□□ -0.47
TMEM53-208ENST00000476724 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
TMEM53-208ENST00000476724 HERVK_113P61574 105 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 NSUN5P1Q3KNT7 163 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 EDA2RQ9HAV5 297 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 H3BMM0 161 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
TMEM53-208ENST00000476724 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
TMEM53-208ENST00000476724 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
TMEM53-208ENST00000476724 KNCNA6PVL3 124 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 HILS1P60008 231 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 NHP2Q9NX24 153 aaKnown RBP12.09□□□□□ -0.47
TMEM53-208ENST00000476724 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 IGLV4-69A0A075B6H9 119 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 TRBV7-3A0A075B6L6 115 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 RBX1P62877 108 aa12.09□□□□□ -0.47
TMEM53-208ENST00000476724 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
TMEM53-208ENST00000476724 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
TMEM53-208ENST00000476724 I3L3M4 83 aa12.08□□□□□ -0.48
TMEM53-208ENST00000476724 SCGB2A2Q13296 93 aa12.08□□□□□ -0.48
TMEM53-208ENST00000476724 OCIAD2Q56VL3 154 aa12.08□□□□□ -0.48
TMEM53-208ENST00000476724 SPAG8Q99932 426 aaPredicted RBP12.08□□□□□ -0.48
TMEM53-208ENST00000476724 NAA38Q9BRA0 125 aaKnown RBP12.08□□□□□ -0.48
TMEM53-208ENST00000476724 C11orf86A6NJI1 115 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 INAFM1C9JVW0 142 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 TMEM61Q8N0U2 210 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 PTH2Q96A98 100 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
TMEM53-208ENST00000476724 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
TMEM53-208ENST00000476724 ZNF815PA8K554 130 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 C12orf74Q32Q52 190 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 KLHL30-AS1Q8NEE0 82 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 A8MWV9 139 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 CD28P10747 220 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 DLX4Q92988 240 aaPredicted RBP12.06□□□□□ -0.48
TMEM53-208ENST00000476724 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
TMEM53-208ENST00000476724 CD300EQ496F6 205 aaPredicted RBP12.05□□□□□ -0.48
TMEM53-208ENST00000476724 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
TMEM53-208ENST00000476724 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
TMEM53-208ENST00000476724 A0A1B0GWB2 263 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 K7ERJ3 54 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 K7ERU9 68 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 M0R2P5 195 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 DEFB114Q30KQ6 69 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 MAP6D1Q9H9H5 199 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 IGLL5B9A064 214 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 P0DMU3 169 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 ZNF415Q09FC8 603 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 SORL1Q92673 2214 aa12.04□□□□□ -0.48
TMEM53-208ENST00000476724 HIVEP1P15822 2718 aa12.03□□□□□ -0.48
TMEM53-208ENST00000476724 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
TMEM53-208ENST00000476724 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
TMEM53-208ENST00000476724 RAX2Q96IS3 184 aa12.03□□□□□ -0.48
TMEM53-208ENST00000476724 TRAV25A0A0B4J276 109 aa12.02□□□□□ -0.48
TMEM53-208ENST00000476724 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.48
TMEM53-208ENST00000476724 A6NJY4 79 aa12.02□□□□□ -0.48
TMEM53-208ENST00000476724 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.48
TMEM53-208ENST00000476724 HTN1P15515 57 aa12.02□□□□□ -0.49
TMEM53-208ENST00000476724 TMEM170BQ5T4T1 132 aa12.02□□□□□ -0.49
TMEM53-208ENST00000476724 ZNF479Q96JC4 524 aa12.01□□□□□ -0.49
TMEM53-208ENST00000476724 CITED2Q99967 270 aaPredicted RBP12.01□□□□□ -0.49
TMEM53-208ENST00000476724 SPXQ9BT56 116 aa12.01□□□□□ -0.49
TMEM53-208ENST00000476724 SETD2Q9BYW2 2564 aaPredicted RBP12.01□□□□□ -0.49
TMEM53-208ENST00000476724 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
TMEM53-208ENST00000476724 ZNRF2Q8NHG8 242 aa12.01□□□□□ -0.49
TMEM53-208ENST00000476724 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
TMEM53-208ENST00000476724 NSD1Q96L73 2696 aaPredicted RBP12□□□□□ -0.49
TMEM53-208ENST00000476724 CRYBA4P53673 196 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms