RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 IGKCP01834 107 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 ZFAND6Q6FIF0 208 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 ATP5LO75964 103 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 CARD19Q96LW7 228 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 MYO9AB2RTY4 2548 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
VARS2-207ENST00000476162 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 JPT2Q9H910 190 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
VARS2-207ENST00000476162 SPINK13Q1W4C9 94 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
VARS2-207ENST00000476162 VCX2Q9H322 139 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 LINC00315P59091 139 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
VARS2-207ENST00000476162 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
VARS2-207ENST00000476162 SMIM20Q8N5G0 67 aa11.85□□□□□ -0.51
VARS2-207ENST00000476162 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
VARS2-207ENST00000476162 ITPR3Q14573 2671 aa11.85□□□□□ -0.51
VARS2-207ENST00000476162 POM121L12Q8N7R1 296 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
VARS2-207ENST00000476162 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 MDFICQ9P1T7 246 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 SONP18583 2426 aaKnown RBP11.84□□□□□ -0.51
VARS2-207ENST00000476162 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 CITED1Q99966 193 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
VARS2-207ENST00000476162 A0A087WWL8 130 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 LINC01619G3V211 115 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 DPM2O94777 84 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
VARS2-207ENST00000476162 KHDC1LQ5JSQ8 128 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 Q8N1Y9 231 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 MRPL35Q9NZE8 188 aaKnown RBP11.83□□□□□ -0.52
VARS2-207ENST00000476162 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
VARS2-207ENST00000476162 PPP1R17O96001 155 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 PTH2Q96A98 100 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
VARS2-207ENST00000476162 A0A087WX48 190 aa11.81□□□□□ -0.52
VARS2-207ENST00000476162 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
VARS2-207ENST00000476162 RHODO00212 210 aa11.81□□□□□ -0.52
VARS2-207ENST00000476162 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
VARS2-207ENST00000476162 SCGB3A1Q96QR1 104 aa11.81□□□□□ -0.52
VARS2-207ENST00000476162 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 GAGE7O76087 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 DEFB131AP59861 70 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 GAGE4Q13068 117 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 F5H697 171 aa11.8□□□□□ -0.52
VARS2-207ENST00000476162 FAM74A4Q5TZK3 123 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 C2orf66Q6UXQ4 117 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 Q6ZSV7 163 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 PEMTQ9UBM1 199 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 CCDC179H3BU77 68 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 PSMB2P49721 201 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
VARS2-207ENST00000476162 TMEM61Q8N0U2 210 aa11.79□□□□□ -0.52
VARS2-207ENST00000476162 DEFB104AQ8WTQ1 72 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
VARS2-207ENST00000476162 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
VARS2-207ENST00000476162 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
VARS2-207ENST00000476162 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
VARS2-207ENST00000476162 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
VARS2-207ENST00000476162 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
VARS2-207ENST00000476162 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
VARS2-207ENST00000476162 H7C1H1 209 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 CRYGDP07320 174 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 F8VRH5 84 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 H3BMM0 161 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 PLNP26678 52 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 UBE2D3P61077 147 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 UBE2D2P62837 147 aa11.76□□□□□ -0.53
VARS2-207ENST00000476162 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 DYNLRB2Q8TF09 96 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 BAALCQ8WXS3 180 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 ESM1Q9NQ30 184 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms