RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CCL25O15444 150 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 PTTG1IPP53801 180 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 TCTAP57738 103 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 DPM2O94777 84 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 ZFP2Q6ZN57 461 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 PTH2Q96A98 100 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 SPXQ9BT56 116 aa11.19□□□□□ -0.62
RPUSD3-215ENST00000475470 A0A087WX48 190 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 BEAN1Q3B7T3 259 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 C1orf158Q8N1D5 194 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 FAM110AQ9BQ89 295 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 H7C1H1 209 aa11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
RPUSD3-215ENST00000475470 TRAV12-1A0A0B4J245 112 aa11.17□□□□□ -0.62
RPUSD3-215ENST00000475470 AZU1P20160 251 aa11.17□□□□□ -0.62
RPUSD3-215ENST00000475470 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
RPUSD3-215ENST00000475470 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
RPUSD3-215ENST00000475470 HHLA3Q9XRX5 114 aa11.17□□□□□ -0.62
RPUSD3-215ENST00000475470 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 CRLF1O75462 422 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 TP53TG1Q9Y2A0 90 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 NMUP48645 174 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
RPUSD3-215ENST00000475470 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.62
RPUSD3-215ENST00000475470 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
RPUSD3-215ENST00000475470 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
RPUSD3-215ENST00000475470 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.62
RPUSD3-215ENST00000475470 RPL35AP18077 110 aaKnown RBP11.15□□□□□ -0.63
RPUSD3-215ENST00000475470 PLNP26678 52 aa11.15□□□□□ -0.63
RPUSD3-215ENST00000475470 BAALCQ8WXS3 180 aa11.15□□□□□ -0.63
RPUSD3-215ENST00000475470 EDA2RQ9HAV5 297 aa11.15□□□□□ -0.63
RPUSD3-215ENST00000475470 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.63
RPUSD3-215ENST00000475470 F8VRH5 84 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 I3L3M4 83 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 RHODO00212 210 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 FGF6P10767 208 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
RPUSD3-215ENST00000475470 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 RHOHQ15669 191 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 TNFRSF18Q9Y5U5 241 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 P0DMU3 169 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 VAMP3Q15836 100 aa11.13□□□□□ -0.63
RPUSD3-215ENST00000475470 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 FN1P02751 2386 aaKnown RBP11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 TSHBP01222 138 aa11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 RNASE8Q8TDE3 154 aaKnown RBP11.12□□□□□ -0.63
RPUSD3-215ENST00000475470 PRSS29PA6NIE9 313 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 RS1O15537 224 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 Q6ZSN1 163 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 PCP2Q8IVA1 136 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 C1QTNF4Q9BXJ3 329 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 TMEM263Q8WUH6 116 aaKnown RBP11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 HIVEP1P15822 2718 aa11.11□□□□□ -0.63
RPUSD3-215ENST00000475470 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 C2CD3Q4AC94 2353 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
RPUSD3-215ENST00000475470 IGHV3-53P01767 116 aa11.09□□□□□ -0.63
RPUSD3-215ENST00000475470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.09□□□□□ -0.63
RPUSD3-215ENST00000475470 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
RPUSD3-215ENST00000475470 PMVKQ15126 192 aa11.08□□□□□ -0.64
RPUSD3-215ENST00000475470 C20orf203Q8NBC4 194 aa11.08□□□□□ -0.64
RPUSD3-215ENST00000475470 SIVA1O15304 175 aa11.08□□□□□ -0.64
RPUSD3-215ENST00000475470 INSL3P51460 131 aa11.08□□□□□ -0.64
RPUSD3-215ENST00000475470 Q9UF83 564 aa11.08□□□□□ -0.64
RPUSD3-215ENST00000475470 C9orf66Q5T8R8 295 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 Q6ZTI0 123 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 CST9LQ9H4G1 147 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 NOP10Q9NPE3 64 aaKnown RBP11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 JMJD1CQ15652 2540 aa11.07□□□□□ -0.64
RPUSD3-215ENST00000475470 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
RPUSD3-215ENST00000475470 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
RPUSD3-215ENST00000475470 CITED1Q99966 193 aa11.06□□□□□ -0.64
RPUSD3-215ENST00000475470 DAZ2Q13117 558 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms