RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 RHODO00212 210 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 LINC00614P0C842 121 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 MIFP14174 115 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 HTN1P15515 57 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-207ENST00000474825 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
ATG4A-207ENST00000474825 IQCJQ1A5X6 159 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 BAGE3Q86Y29 109 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 Q8NAQ8 132 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 HIST1H2BLQ99880 126 aa4.72□□□□□ -1.65
ATG4A-207ENST00000474825 IGHV3OR16-12A0A075B7B8 117 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 A0A087WWL8 130 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 LYRM9A8MSI8 78 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 SMKR1H3BMG3 65 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 NCR2O95944 276 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 SMIM17P0DL12 118 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 PMCHP20382 165 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 Q6ZTI0 123 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 Q8N8P6 123 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 MAP1LC3AQ9H492 121 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 NOP10Q9NPE3 64 aaKnown RBP4.71□□□□□ -1.66
ATG4A-207ENST00000474825 NXT2Q9NPJ8 142 aaKnown RBP4.71□□□□□ -1.66
ATG4A-207ENST00000474825 MRPL16Q9NX20 251 aaKnown RBP4.71□□□□□ -1.66
ATG4A-207ENST00000474825 NBEAL2Q6ZNJ1 2754 aa4.71□□□□□ -1.66
ATG4A-207ENST00000474825 PRKDCP78527 4128 aaKnown RBP4.7□□□□□ -1.66
ATG4A-207ENST00000474825 A0A096LNJ9 63 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 K7EIL1 84 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 IFI27P40305 119 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-207ENST00000474825 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
ATG4A-207ENST00000474825 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 Q6ZSN1 163 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 OR11H2Q8NH07 326 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 DNAJC30Q96LL9 226 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 TMEM70Q9BUB7 260 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 SMIM2Q9BVW6 85 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 NIT2Q9NQR4 276 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
ATG4A-207ENST00000474825 NOTCH1P46531 2555 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 IGHV1-24A0A0C4DH33 117 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 IGHV4-28A0A0C4DH34 117 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 TRBV10-1A0A0K0K1A3 114 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 TRBV6-4A0A1B0GX49 114 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 H7C1H1 209 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 HSBP1O75506 76 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 MGPP08493 103 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 OR4C5Q8NGB2 326 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 PRSS3P2Q8NHM4 247 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
ATG4A-207ENST00000474825 ZNF479Q96JC4 524 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 DKK2Q9UBU2 259 aa4.69□□□□□ -1.66
ATG4A-207ENST00000474825 VCYO14598 125 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 FABP4P15090 132 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 S100A2P29034 98 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 FHL2Q14192 279 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 ZNF56Q15929 161 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 PDZD11Q5EBL8 140 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 FAM74A4Q5TZK3 123 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 RNASEKQ6P5S7 137 aaKnown RBP4.68□□□□□ -1.66
ATG4A-207ENST00000474825 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 LINC00469Q8N7U9 141 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 TM2D3Q9BRN9 247 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 C11orf68Q9H3H3 251 aaKnown RBP4.68□□□□□ -1.66
ATG4A-207ENST00000474825 ST20Q9HBF5 79 aa4.68□□□□□ -1.66
ATG4A-207ENST00000474825 LOC389332A0A1B0GUA5 103 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 TEX48A0A1B0GUV7 120 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 GAGE12BA1L429 117 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 F5H697 171 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 TCAPO15273 167 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 GAGE7O76087 117 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 FCER1GP30273 86 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 AMTP48728 403 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 S100A12P80511 92 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 LAGE3Q14657 143 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 JOSD1Q15040 202 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-207ENST00000474825 SPATA12Q7Z6I5 190 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 FAM19A2Q8N3H0 131 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 OR10D4PQ8NGN7 298 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 MRAPQ8TCY5 172 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 Q9UF83 564 aa4.67□□□□□ -1.66
ATG4A-207ENST00000474825 NACAE9PAV3 2078 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 TRGV2A0A075B6R0 118 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 IGHV3-73A0A0B4J1V6 119 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 LINC01549A6NIU2 74 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 PCP4L1A6NKN8 68 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 K7EQD1 137 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 EIF4EBP3O60516 100 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-207ENST00000474825 HBDP02042 147 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms