RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
CCDC78-209ENST00000474647 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
CCDC78-209ENST00000474647 TMEM218A2RU14 115 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 A8MWV9 139 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 S100A4P26447 101 aaKnown RBP9.17□□□□□ -0.94
CCDC78-209ENST00000474647 KRTAP10-4P60372 401 aaPredicted RBP9.17□□□□□ -0.94
CCDC78-209ENST00000474647 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 PTH2Q96A98 100 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 Q9UF83 564 aa9.17□□□□□ -0.94
CCDC78-209ENST00000474647 A0A087WWC5 75 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 OXTP01178 125 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 CRIP1P50238 77 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
CCDC78-209ENST00000474647 JPT2Q9H910 190 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 NAT8Q9UHE5 227 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 KLK12Q9UKR0 248 aa9.16□□□□□ -0.94
CCDC78-209ENST00000474647 FABP5P3A8MUU1 101 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 K7EN84 100 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 SH2D1AO60880 128 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 APOC3P02656 99 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 PRR27Q6MZM9 219 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 ATRAIDQ6UW56 229 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 OCC1Q8TAD7 63 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 UBE2WQ96B02 151 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 BIN3Q9NQY0 253 aa9.15□□□□□ -0.94
CCDC78-209ENST00000474647 ADCYAP1P18509 176 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 ASIPP42127 132 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 TMEM241Q24JQ0 296 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 NIT1Q86X76 327 aa9.14□□□□□ -0.95
CCDC78-209ENST00000474647 A0A087WX48 190 aa9.13□□□□□ -0.95
CCDC78-209ENST00000474647 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
CCDC78-209ENST00000474647 H3BVH4 76 aa9.13□□□□□ -0.95
CCDC78-209ENST00000474647 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
CCDC78-209ENST00000474647 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
CCDC78-209ENST00000474647 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
CCDC78-209ENST00000474647 CARHSP1Q9Y2V2 147 aaKnown RBP9.13□□□□□ -0.95
CCDC78-209ENST00000474647 IGKV3D-20A0A0C4DH25 116 aa9.12□□□□□ -0.95
CCDC78-209ENST00000474647 F8W036 122 aa9.12□□□□□ -0.95
CCDC78-209ENST00000474647 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
CCDC78-209ENST00000474647 SEC11CQ9BY50 192 aa9.12□□□□□ -0.95
CCDC78-209ENST00000474647 RHODO00212 210 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
CCDC78-209ENST00000474647 ADIRFQ15847 76 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 UFSP1Q6NVU6 142 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 FAM231DQ6ZW35 169 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 ISOC2Q96AB3 205 aa9.11□□□□□ -0.95
CCDC78-209ENST00000474647 A0A087WWL8 130 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 B4DEV8 164 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 ELOBQ15370 118 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.1□□□□□ -0.95
CCDC78-209ENST00000474647 DAZAP1Q96EP5 407 aaKnown RBP9.1□□□□□ -0.95
CCDC78-209ENST00000474647 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
CCDC78-209ENST00000474647 IL36BQ9NZH7 164 aa9.1□□□□□ -0.95
CCDC78-209ENST00000474647 M0R036 132 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 P01737 135 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 CRPP02741 224 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 CXCL1P09341 107 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 RPL19P84098 196 aaKnown RBP9.09□□□□□ -0.95
CCDC78-209ENST00000474647 Q0VG73 95 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 NUDT10Q8NFP7 164 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 NUDT11Q96G61 164 aa9.09□□□□□ -0.95
CCDC78-209ENST00000474647 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 TMEM262E9PQX1 116 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 ARMS2P0C7Q2 107 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 HNRNPA3P51991 378 aaKnown RBP9.08□□□□□ -0.96
CCDC78-209ENST00000474647 DNLZQ5SXM8 178 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 SVBPQ8N300 66 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 SFRP2Q96HF1 295 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 CHCHD7Q9BUK0 85 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
CCDC78-209ENST00000474647 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
CCDC78-209ENST00000474647 TMSB15BA0A087X1C1 80 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 M0R381 172 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
CCDC78-209ENST00000474647 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
CCDC78-209ENST00000474647 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
CCDC78-209ENST00000474647 CT83Q5H943 113 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 OR2D3Q8NGH3 330 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
CCDC78-209ENST00000474647 PHLDA3Q9Y5J5 127 aa9.07□□□□□ -0.96
CCDC78-209ENST00000474647 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
CCDC78-209ENST00000474647 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
CCDC78-209ENST00000474647 SNAPINO95295 136 aa9.05□□□□□ -0.96
CCDC78-209ENST00000474647 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
CCDC78-209ENST00000474647 UBE2D3P61077 147 aa9.05□□□□□ -0.96
CCDC78-209ENST00000474647 UBE2D2P62837 147 aa9.05□□□□□ -0.96
CCDC78-209ENST00000474647 MPV17L2Q567V2 206 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms