RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TCL1BO95988 128 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 LRRK1Q38SD2 2015 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 CDPF1Q6NVV7 123 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 UNQ9165/PRO28630Q6UXU0 137 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 PATE2Q6UY27 113 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 WDFY3Q8IZQ1 3526 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 ATOH7Q8N100 152 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 Q9H8V8 135 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 PRO1854Q9UHT4 67 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 ZNF407Q9C0G0 2248 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 E7EUB6 86 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 COX7BP24311 80 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 MRPS36P82909 103 aaKnown RBP3.45□□□□□ -1.86
CCNL1-215ENST00000474539 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
CCNL1-215ENST00000474539 NPYP01303 97 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 LYPD6BQ8NI32 183 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 SZT2Q5T011 3432 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 CD300CQ08708 224 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 EIF4EBP1Q13541 118 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 NTN5Q8WTR8 489 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 SND1-IT1Q9HBX3 110 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 MALRD1Q5VYJ5 2156 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 OTOGLQ3ZCN5 2332 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 REV3LO60673 3130 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 IGKV2-29A2NJV5 120 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BKO60814 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BJP06899 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BOP23527 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BBP33778 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BDP58876 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BCP62807 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST2H2BEQ16778 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BHQ93079 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BNQ99877 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 HIST1H2BMQ99879 126 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 C5orf38Q86SI9 138 aa3.44□□□□□ -1.86
CCNL1-215ENST00000474539 CHCHD10Q8WYQ3 142 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
CCNL1-215ENST00000474539 DOCK10Q96BY6 2186 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 KLLNB2CW77 178 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 B5MCH6 92 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 RITA1Q96K30 269 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 TMEM256-PLSCR3K7ERE1 68 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 SPINK8P0C7L1 97 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 C3orf79P0CE67 100 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 A0A1B0GX51 115 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 ZNF726P1Q15940 193 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 DYSFO75923 2080 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 USF3Q68DE3 2245 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 ALPK2Q86TB3 2170 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 CACNA1GO43497 2377 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 TIMM17BO60830 172 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 TRACP01848 142 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 MP68P56378 58 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 CTAG1AP78358 180 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 C9orf153Q5TBE3 101 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 CEMP1Q6PRD7 247 aaPredicted RBP3.43□□□□□ -1.86
CCNL1-215ENST00000474539 SPATA12Q7Z6I5 190 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
CCNL1-215ENST00000474539 PIEZO1Q92508 2521 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 COX8AP10176 69 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 GATA1P15976 413 aaPredicted RBP3.42□□□□□ -1.86
CCNL1-215ENST00000474539 Q6ZTI0 123 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 HIST3H2BBQ8N257 126 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 MLST8Q9BVC4 326 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 VCANP13611 3396 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 DSCAMO60469 2012 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 IGLV5-52A0A0A0MRZ9 124 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 M0R378 163 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 CFAP126Q5VTH2 177 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 C14orf144Q96I85 54 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 C17orf77Q96MU5 243 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 BBC3Q96PG8 261 aaPredicted RBP3.42□□□□□ -1.86
CCNL1-215ENST00000474539 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 YLPM1P49750 1951 aaKnown RBP3.42□□□□□ -1.86
CCNL1-215ENST00000474539 MPDZO75970 2070 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 IGKV1D-37A0A075B6S9 117 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 TRAV26-2A0A0B4J265 109 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 FAM229AH3BQW9 127 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 H3BUT2 72 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 EGFEM1PQ0D2K5 195 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 ATRAIDQ6UW56 229 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 GTSF1Q8WW33 167 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 MRPL35Q9NZE8 188 aaKnown RBP3.42□□□□□ -1.86
CCNL1-215ENST00000474539 A0A087WZ39 114 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 IGLV2-14P01704 120 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 IGLC6P0CF74 106 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 CLPSL2Q6UWE3 100 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
CCNL1-215ENST00000474539 SELENOKQ9Y6D0 94 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms