RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 GCHFRP30047 84 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 HIGD2BQ4VC39 106 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 HSPB11Q9Y547 144 aa9.84□□□□□ -0.83
HPS4-210ENST00000473782 TRBV25-1A0A075B6N4 114 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 A0A1B0GUV1 79 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 LYRM1O43325 122 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 IFNA7P01567 189 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 SCGB1C1Q8TD33 95 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 SMIM3Q9BZL3 60 aa9.83□□□□□ -0.84
HPS4-210ENST00000473782 TMSB15BA0A087X1C1 80 aa9.82□□□□□ -0.84
HPS4-210ENST00000473782 NOL3O60936 208 aaKnown RBP9.82□□□□□ -0.84
HPS4-210ENST00000473782 ZNF56Q15929 161 aa9.82□□□□□ -0.84
HPS4-210ENST00000473782 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
HPS4-210ENST00000473782 Q86TA4 180 aa9.82□□□□□ -0.84
HPS4-210ENST00000473782 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
HPS4-210ENST00000473782 PRR4Q16378 134 aa9.81□□□□□ -0.84
HPS4-210ENST00000473782 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 H2AFB2P0C5Z0 115 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 CDC34P49427 236 aaPredicted RBP9.8□□□□□ -0.84
HPS4-210ENST00000473782 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 OR10AG1Q8NH19 301 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 RAB24Q969Q5 203 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 CRCT1Q9UGL9 99 aa9.8□□□□□ -0.84
HPS4-210ENST00000473782 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
HPS4-210ENST00000473782 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
HPS4-210ENST00000473782 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
HPS4-210ENST00000473782 AQP10Q96PS8 301 aa9.79□□□□□ -0.84
HPS4-210ENST00000473782 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
HPS4-210ENST00000473782 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
HPS4-210ENST00000473782 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.78□□□□□ -0.84
HPS4-210ENST00000473782 CACNG7P62955 275 aa9.77□□□□□ -0.85
HPS4-210ENST00000473782 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
HPS4-210ENST00000473782 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
HPS4-210ENST00000473782 H2BFSP57053 126 aa9.76□□□□□ -0.85
HPS4-210ENST00000473782 PPP1R1CQ8WVI7 109 aa9.76□□□□□ -0.85
HPS4-210ENST00000473782 ZNF471Q9BX82 626 aaPredicted RBP9.76□□□□□ -0.85
HPS4-210ENST00000473782 MUC21A0A140T8X8 626 aa9.75□□□□□ -0.85
HPS4-210ENST00000473782 A0A1W2PRE2 83 aa9.75□□□□□ -0.85
HPS4-210ENST00000473782 PEX7O00628 323 aa9.75□□□□□ -0.85
HPS4-210ENST00000473782 RPL12P30050 165 aaKnown RBP9.75□□□□□ -0.85
HPS4-210ENST00000473782 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
HPS4-210ENST00000473782 F5H697 171 aa9.74□□□□□ -0.85
HPS4-210ENST00000473782 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
HPS4-210ENST00000473782 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
HPS4-210ENST00000473782 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
HPS4-210ENST00000473782 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
HPS4-210ENST00000473782 M0QY20 66 aa9.73□□□□□ -0.85
HPS4-210ENST00000473782 SNAI2O43623 268 aa9.73□□□□□ -0.85
HPS4-210ENST00000473782 ZFP30Q9Y2G7 519 aa9.73□□□□□ -0.85
HPS4-210ENST00000473782 MPC2O95563 127 aa9.72□□□□□ -0.85
HPS4-210ENST00000473782 CXorf1O96002 111 aa9.72□□□□□ -0.85
HPS4-210ENST00000473782 SULT1A2P50226 295 aa9.72□□□□□ -0.85
HPS4-210ENST00000473782 DEFA3P59666 94 aa9.72□□□□□ -0.85
HPS4-210ENST00000473782 FOXI1Q12951 378 aa9.72□□□□□ -0.85
HPS4-210ENST00000473782 CHCHD10Q8WYQ3 142 aaPredicted RBP9.72□□□□□ -0.85
HPS4-210ENST00000473782 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
HPS4-210ENST00000473782 CYCSP99999 105 aaKnown RBP9.71□□□□□ -0.86
HPS4-210ENST00000473782 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
HPS4-210ENST00000473782 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
HPS4-210ENST00000473782 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 LTAP01374 205 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 MT-ND6P03923 174 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 ATP6V0CP27449 155 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 UBE2G2P60604 165 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 HIST1H2BAQ96A08 127 aa9.69□□□□□ -0.86
HPS4-210ENST00000473782 CCDC160A6NGH7 325 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 CXCL1P09341 107 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 OR5AL1P0C617 328 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 AMTP48728 403 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 SSTP61278 116 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
HPS4-210ENST00000473782 FAM240BA0A1B0GVZ2 78 aa9.67□□□□□ -0.86
HPS4-210ENST00000473782 H0Y9J4 135 aa9.67□□□□□ -0.86
HPS4-210ENST00000473782 NKX2-5P52952 324 aaPredicted RBP9.67□□□□□ -0.86
HPS4-210ENST00000473782 SUMO4Q6EEV6 95 aa9.67□□□□□ -0.86
HPS4-210ENST00000473782 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
HPS4-210ENST00000473782 FMC1Q96HJ9 113 aa9.67□□□□□ -0.86
HPS4-210ENST00000473782 PGLYRP4Q96LB8 373 aa9.67□□□□□ -0.86
HPS4-210ENST00000473782 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
HPS4-210ENST00000473782 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
HPS4-210ENST00000473782 A6NHS1 94 aa9.65□□□□□ -0.86
HPS4-210ENST00000473782 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
HPS4-210ENST00000473782 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
HPS4-210ENST00000473782 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.86
HPS4-210ENST00000473782 MED28Q9H204 178 aa9.64□□□□□ -0.87
HPS4-210ENST00000473782 PKIGQ9Y2B9 76 aa9.64□□□□□ -0.87
HPS4-210ENST00000473782 UBE2L6O14933 153 aa9.63□□□□□ -0.87
HPS4-210ENST00000473782 MBP02144 154 aa9.63□□□□□ -0.87
HPS4-210ENST00000473782 SERF2P84101 59 aa9.63□□□□□ -0.87
HPS4-210ENST00000473782 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms