RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SLC25A29Q8N8R3 303 aa15.67■□□□□ 0.1
COL18A1-207ENST00000473212 PTH2Q96A98 100 aa15.67■□□□□ 0.1
COL18A1-207ENST00000473212 IGHV3-16A0A0C4DH30 117 aa15.66■□□□□ 0.1
COL18A1-207ENST00000473212 AMELXQ99217 191 aa15.66■□□□□ 0.1
COL18A1-207ENST00000473212 TRBV6-5A0A0K0K1A5 114 aa15.65■□□□□ 0.1
COL18A1-207ENST00000473212 J3QQQ9 107 aa15.65■□□□□ 0.1
COL18A1-207ENST00000473212 K7EMT4 169 aa15.65■□□□□ 0.1
COL18A1-207ENST00000473212 C9orf85Q96MD7 179 aa15.65■□□□□ 0.1
COL18A1-207ENST00000473212 ATP6V0E2Q8NHE4 81 aa15.65■□□□□ 0.1
COL18A1-207ENST00000473212 TCL1BO95988 128 aa15.64■□□□□ 0.09
COL18A1-207ENST00000473212 SYT8Q8NBV8 401 aa15.64■□□□□ 0.09
COL18A1-207ENST00000473212 M0QY20 66 aa15.64■□□□□ 0.09
COL18A1-207ENST00000473212 TGFAP01135 160 aa15.64■□□□□ 0.09
COL18A1-207ENST00000473212 Q8N1Y9 231 aa15.64■□□□□ 0.09
COL18A1-207ENST00000473212 CIDEAO60543 219 aa15.63■□□□□ 0.09
COL18A1-207ENST00000473212 LGALS3P17931 250 aaKnown RBP15.63■□□□□ 0.09
COL18A1-207ENST00000473212 SPINK13Q1W4C9 94 aa15.63■□□□□ 0.09
COL18A1-207ENST00000473212 DEFB112Q30KQ8 113 aa15.63■□□□□ 0.09
COL18A1-207ENST00000473212 PSMB8P28062 276 aa15.63■□□□□ 0.09
COL18A1-207ENST00000473212 LYRM7Q5U5X0 104 aa15.62■□□□□ 0.09
COL18A1-207ENST00000473212 C10orf126Q8N4M7 172 aa15.62■□□□□ 0.09
COL18A1-207ENST00000473212 MYO9AB2RTY4 2548 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 IGHV3-64A0A075B6Q5 118 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 A0A0J9YX75 114 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 PRM2P04554 102 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 P0DMU3 169 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 FAM231AP0DMU4 169 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 FAM231CP0DMU5 169 aa15.61■□□□□ 0.09
COL18A1-207ENST00000473212 SYNJ2BPP57105 145 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 CDIP1Q9H305 208 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 LRRK2Q5S007 2527 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 ABCA12Q86UK0 2595 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 NSUN5P1Q3KNT7 163 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 PRO1854Q9UHT4 67 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 PTPN13Q12923 2485 aa15.6■□□□□ 0.09
COL18A1-207ENST00000473212 TLN2Q9Y4G6 2542 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 SCGB1C2P0DMR2 95 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 FHL3Q13643 280 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 TMEM223A0PJW6 202 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 RHOHQ15669 191 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 TRPT1Q86TN4 253 aaKnown RBP15.59■□□□□ 0.09
COL18A1-207ENST00000473212 CARD19Q96LW7 228 aa15.59■□□□□ 0.09
COL18A1-207ENST00000473212 IGHV1OR15-1A0A075B7D0 117 aa15.58■□□□□ 0.09
COL18A1-207ENST00000473212 HIST2H2BDQ6DRA6 164 aa15.58■□□□□ 0.09
COL18A1-207ENST00000473212 TEX15Q9BXT5 2789 aa15.58■□□□□ 0.08
COL18A1-207ENST00000473212 TRBV20-1A0A075B6N2 111 aa15.58■□□□□ 0.08
COL18A1-207ENST00000473212 SNRPD3P62318 126 aaKnown RBP15.58■□□□□ 0.08
COL18A1-207ENST00000473212 ODF3Q96PU9 254 aa15.58■□□□□ 0.08
COL18A1-207ENST00000473212 A4D1N5 150 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 LEPROTO15243 131 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 TEN1Q86WV5 123 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 RAX2Q96IS3 184 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 HTN1P15515 57 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 C20orf203Q8NBC4 194 aa15.57■□□□□ 0.08
COL18A1-207ENST00000473212 ZNF469Q96JG9 3925 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-207ENST00000473212 A0A1B0GV72 72 aa15.56■□□□□ 0.08
COL18A1-207ENST00000473212 B4DSR2 109 aa15.56■□□□□ 0.08
COL18A1-207ENST00000473212 PPDPFLQ8WWR9 84 aa15.56■□□□□ 0.08
COL18A1-207ENST00000473212 A0A0J9YXV3 536 aa15.56■□□□□ 0.08
COL18A1-207ENST00000473212 EIF4EBP3O60516 100 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-207ENST00000473212 ZNF22P17026 224 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-207ENST00000473212 TRAV2A0A0B4J234 112 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 K7EQG2 157 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 IGHV3-73A0A0B4J1V6 119 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 A8MWV9 139 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 I3L3M4 83 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 RHODO00212 210 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 ZNF580Q9UK33 172 aa15.55■□□□□ 0.08
COL18A1-207ENST00000473212 RBMY1A1P0DJD3 496 aaKnown RBP15.54■□□□□ 0.08
COL18A1-207ENST00000473212 RBMY1CP0DJD4 496 aa15.54■□□□□ 0.08
COL18A1-207ENST00000473212 RBMY1FQ15415 496 aaKnown RBP15.54■□□□□ 0.08
COL18A1-207ENST00000473212 H7C2G1 150 aa15.54■□□□□ 0.08
COL18A1-207ENST00000473212 IGLV4-3A0A075B6K6 122 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 PROK1P58294 105 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 C18orf65Q6ZTR6 163 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 MUSTN1Q8IVN3 82 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 SBSPONQ8IVN8 264 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 VCX2Q9H322 139 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 MT-ATP8P03928 68 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 CKS1BP61024 79 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 DEFB136Q30KP8 78 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 Q9UF83 564 aa15.53■□□□□ 0.08
COL18A1-207ENST00000473212 ANKRD29Q8N6D5 301 aa15.52■□□□□ 0.08
COL18A1-207ENST00000473212 SPINK8P0C7L1 97 aa15.52■□□□□ 0.07
COL18A1-207ENST00000473212 TMEM263Q8WUH6 116 aaKnown RBP15.52■□□□□ 0.07
COL18A1-207ENST00000473212 IGHV3-33P01772 117 aa15.51■□□□□ 0.07
COL18A1-207ENST00000473212 TCTEX1D4Q5JR98 221 aa15.51■□□□□ 0.07
COL18A1-207ENST00000473212 ZNF462Q96JM2 2506 aa15.51■□□□□ 0.07
COL18A1-207ENST00000473212 KNCNA6PVL3 124 aa15.51■□□□□ 0.07
COL18A1-207ENST00000473212 XGP55808 180 aa15.51■□□□□ 0.07
COL18A1-207ENST00000473212 CRYBA4P53673 196 aa15.5■□□□□ 0.07
COL18A1-207ENST00000473212 Q6ZUT4 128 aa15.5■□□□□ 0.07
COL18A1-207ENST00000473212 AKAP9Q99996 3911 aa15.5■□□□□ 0.07
COL18A1-207ENST00000473212 HOXD3P31249 432 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-207ENST00000473212 SPXQ9BT56 116 aa15.49■□□□□ 0.07
COL18A1-207ENST00000473212 ERG28Q9UKR5 140 aa15.49■□□□□ 0.07
COL18A1-207ENST00000473212 ADARB2-AS1A8MUL3 147 aa15.49■□□□□ 0.07
COL18A1-207ENST00000473212 SONP18583 2426 aaKnown RBP15.49■□□□□ 0.07
COL18A1-207ENST00000473212 NOTCH3Q9UM47 2321 aa15.48■□□□□ 0.07
COL18A1-207ENST00000473212 DUX3Q96PT4 197 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms