RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
VPS13D-205ENST00000473099 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
VPS13D-205ENST00000473099 G0S2P27469 103 aa9.18□□□□□ -0.94
VPS13D-205ENST00000473099 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
VPS13D-205ENST00000473099 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
VPS13D-205ENST00000473099 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
VPS13D-205ENST00000473099 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 LINC01549A6NIU2 74 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 VCYO14598 125 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 GAGE7O76087 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 Q8NAQ8 132 aa9.17□□□□□ -0.94
VPS13D-205ENST00000473099 IGHV4-28A0A0C4DH34 117 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 TRBV10-1A0A0K0K1A3 114 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 SDHAF1A6NFY7 115 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 HBDP02042 147 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
VPS13D-205ENST00000473099 LAGE3Q14657 143 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-205ENST00000473099 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 TMEM70Q9BUB7 260 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
VPS13D-205ENST00000473099 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 FCER1GP30273 86 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 EMP1P54849 157 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 ZNF479Q96JC4 524 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.94
VPS13D-205ENST00000473099 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
VPS13D-205ENST00000473099 K7EQD1 137 aa9.14□□□□□ -0.95
VPS13D-205ENST00000473099 DKK2Q9UBU2 259 aa9.14□□□□□ -0.95
VPS13D-205ENST00000473099 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
VPS13D-205ENST00000473099 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
VPS13D-205ENST00000473099 I3L3M4 83 aa9.13□□□□□ -0.95
VPS13D-205ENST00000473099 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
VPS13D-205ENST00000473099 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
VPS13D-205ENST00000473099 K7EIL1 84 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 DAD1P61803 113 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
VPS13D-205ENST00000473099 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
VPS13D-205ENST00000473099 RHOHQ15669 191 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
VPS13D-205ENST00000473099 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
VPS13D-205ENST00000473099 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
VPS13D-205ENST00000473099 TGP01266 2768 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 A0A096LNJ9 63 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 NUDT3O95989 172 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
VPS13D-205ENST00000473099 DEFA6Q01524 100 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 Q6ZSN1 163 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 MAP1LC3CQ9BXW4 147 aa9.11□□□□□ -0.95
VPS13D-205ENST00000473099 ATP5LO75964 103 aa9.1□□□□□ -0.95
VPS13D-205ENST00000473099 KRTDAPP60985 99 aa9.1□□□□□ -0.95
VPS13D-205ENST00000473099 FHL2Q14192 279 aa9.1□□□□□ -0.95
VPS13D-205ENST00000473099 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
VPS13D-205ENST00000473099 ATP5G1P05496 136 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 C3orf79P0CE67 100 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 P0DMU3 169 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 FAM231AP0DMU4 169 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 FAM231CP0DMU5 169 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 DAZ4Q86SG3 579 aaKnown RBP9.09□□□□□ -0.95
VPS13D-205ENST00000473099 DAZ3Q9NR90 486 aaKnown RBP9.09□□□□□ -0.95
VPS13D-205ENST00000473099 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
VPS13D-205ENST00000473099 C20orf202A1L168 122 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 DEFB121Q5J5C9 76 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
VPS13D-205ENST00000473099 DEFB4AO15263 64 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 SCGB1D1O95968 90 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 TSHBP01222 138 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 COTL1Q14019 142 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 TMEM97Q5BJF2 176 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 C2orf66Q6UXQ4 117 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 SPATA12Q7Z6I5 190 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 SBSPONQ8IVN8 264 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
VPS13D-205ENST00000473099 SYS1-DBNDD2H3BUS1 97 aa9.06□□□□□ -0.96
VPS13D-205ENST00000473099 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-205ENST00000473099 CRYBA4P53673 196 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms