RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
RRP1-202ENST00000471909 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 ODF3Q96PU9 254 aa12.9□□□□□ -0.34
RRP1-202ENST00000471909 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 RASL10AQ92737 203 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 CUBNO60494 3623 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 KHDC1LQ5JSQ8 128 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 C14orf178Q8N769 122 aaPredicted RBP12.89□□□□□ -0.35
RRP1-202ENST00000471909 BAALCQ8WXS3 180 aa12.89□□□□□ -0.35
RRP1-202ENST00000471909 ZNF815PA8K554 130 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 SCGB1D4Q6XE38 83 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 RPL39LQ96EH5 51 aaKnown RBP12.88□□□□□ -0.35
RRP1-202ENST00000471909 DPH3P1Q9H4G8 78 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 ESM1Q9NQ30 184 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
RRP1-202ENST00000471909 DLX4Q92988 240 aaPredicted RBP12.88□□□□□ -0.35
RRP1-202ENST00000471909 NF1P21359 2839 aa12.87□□□□□ -0.35
RRP1-202ENST00000471909 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
RRP1-202ENST00000471909 UNC79Q9P2D8 2635 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 PRSS29PA6NIE9 313 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 NXPH4O95158 308 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 SRSF9Q13242 221 aaKnown RBP eCLIP12.86□□□□□ -0.35
RRP1-202ENST00000471909 LINC01549A6NIU2 74 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 MGPP08493 103 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 CD7P09564 240 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 FOXI1Q12951 378 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 KLHL30-AS1Q8NEE0 82 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
RRP1-202ENST00000471909 SORL1Q92673 2214 aa12.85□□□□□ -0.35
RRP1-202ENST00000471909 ACANP16112 2415 aa12.85□□□□□ -0.35
RRP1-202ENST00000471909 LOC107984156A0A0G2JMH3 177 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 UBE2D1P51668 147 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 ARL17AQ8IVW1 177 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 PLEKHB2Q96CS7 222 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 PEMTQ9UBM1 199 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
RRP1-202ENST00000471909 CKS1BP61024 79 aa12.84□□□□□ -0.35
RRP1-202ENST00000471909 MUC4Q99102 2169 aa12.83□□□□□ -0.35
RRP1-202ENST00000471909 PSMB2P49721 201 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 KIF25-AS1Q9Y6Z4 181 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 TSPAN13O95857 204 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 SMCPP49901 116 aaPredicted RBP12.83□□□□□ -0.36
RRP1-202ENST00000471909 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
RRP1-202ENST00000471909 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 LINC00315P59091 139 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 JPT2Q9H910 190 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 ANK3Q12955 4377 aaKnown RBP12.82□□□□□ -0.36
RRP1-202ENST00000471909 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 PPP1R17O96001 155 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 DEFB131AP59861 70 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 LYRM7Q5U5X0 104 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 POM121L12Q8N7R1 296 aa12.82□□□□□ -0.36
RRP1-202ENST00000471909 Q8N1Y9 231 aa12.81□□□□□ -0.36
RRP1-202ENST00000471909 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
RRP1-202ENST00000471909 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
RRP1-202ENST00000471909 C9orf85Q96MD7 179 aa12.81□□□□□ -0.36
RRP1-202ENST00000471909 HERVK_113P61574 105 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 IGHV1OR15-1A0A075B7D0 117 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 UBE2D3P61077 147 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 UBE2D2P62837 147 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 NFE4Q86UQ8 179 aa12.8□□□□□ -0.36
RRP1-202ENST00000471909 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 DEFB114Q30KQ6 69 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 PAPPA-AS1Q5QFB9 102 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 CDIP1Q9H305 208 aa12.79□□□□□ -0.36
RRP1-202ENST00000471909 A0A087WWL8 130 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 CRYGDP07320 174 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 DYNLRB2Q8TF09 96 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 H3BMM0 161 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 RBMY1A1P0DJD3 496 aaKnown RBP12.78□□□□□ -0.36
RRP1-202ENST00000471909 RBMY1CP0DJD4 496 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 CD28P10747 220 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 RBMY1FQ15415 496 aaKnown RBP12.78□□□□□ -0.36
RRP1-202ENST00000471909 NDUFA11Q86Y39 141 aa12.78□□□□□ -0.36
RRP1-202ENST00000471909 MTORP42345 2549 aa12.77□□□□□ -0.36
RRP1-202ENST00000471909 IGLV4-69A0A075B6H9 119 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 A0A0J9YY99 117 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 A0A1W2PRX2 142 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 A8MTW9 85 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 SPINK8P0C7L1 97 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 EMP1P54849 157 aa12.77□□□□□ -0.37
RRP1-202ENST00000471909 GCN1Q92616 2671 aaKnown RBP12.76□□□□□ -0.37
RRP1-202ENST00000471909 RBMY1BA6NDE4 496 aaKnown RBP12.76□□□□□ -0.37
RRP1-202ENST00000471909 RBMY1EA6NEQ0 496 aaKnown RBP12.76□□□□□ -0.37
RRP1-202ENST00000471909 RBMY1DP0C7P1 496 aaKnown RBP12.76□□□□□ -0.37
RRP1-202ENST00000471909 PPDPFLQ8WWR9 84 aa12.76□□□□□ -0.37
RRP1-202ENST00000471909 PTH2Q96A98 100 aa12.76□□□□□ -0.37
RRP1-202ENST00000471909 TSHBP01222 138 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms