RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 FLG2Q5D862 2391 aaPredicted RBP1.83□□□□□ -2.12
HDAC9-221ENST00000471887 A0A087WXM4 84 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 TRAV8-2A0A0B4J237 113 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 A0A1B0GU33 70 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 FAM240AA0A1B0GVK7 77 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 CEBPZOSA8MTT3 80 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 SNRPGP15A8MWD9 76 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 DISC1C4P0D8 188 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 H3BRN7 92 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 BOLA2-SMG1P6H3BVE0 249 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 GABARAPH6UMI1 98 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 HPGDSO60760 199 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 ATP5G1P05496 136 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 ATP5G3P48201 142 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 EMP1P54849 157 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 FXYD7P58549 80 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 DEFB1P60022 68 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 NCS1P62166 190 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 ZNF90Q03938 601 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 SMCO1Q147U7 214 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 EBLN2Q6P2I7 272 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 OR8I2Q8N0Y5 310 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 OR4B1Q8NGF8 309 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 OR4C16Q8NGL9 310 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM263Q8WUH6 116 aaKnown RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 ACY3Q96HD9 319 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 CIB3Q96Q77 187 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 PRRT1Q99946 306 aa1.82□□□□□ -2.12
HDAC9-221ENST00000471887 C7orf50Q9BRJ6 194 aaKnown RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 C14orf166Q9Y224 244 aaKnown RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 MRPS16Q9Y3D3 137 aaKnown RBP1.82□□□□□ -2.12
HDAC9-221ENST00000471887 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 ANKRD20A5PA0PJZ0 165 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 A8MWP4 228 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 FAM25AB3EWG3 89 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 FAM25CB3EWG5 89 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 FAM25GB3EWG6 89 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 FNDC10F2Z333 226 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 H7BYZ3 331 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 M0R2Z0 102 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 TCAPO15273 167 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 COX7A2P2O60397 106 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 ADAP1O75689 374 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 AKAIN1P0CW23 69 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 HTN3P15516 51 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 AKR1C4P17516 323 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 RPL7P18124 248 aaKnown RBP1.81□□□□□ -2.12
HDAC9-221ENST00000471887 CXCL3P19876 107 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 VBP1P61758 197 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 LSM3P62310 102 aaKnown RBP1.81□□□□□ -2.12
HDAC9-221ENST00000471887 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 SCGB2B2Q4G0G5 96 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 SSX7Q7RTT5 188 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 LYZL2Q7Z4W2 148 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 SPATA12Q7Z6I5 190 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 BAP18Q8IXM2 172 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 ZNF738Q8NE65 137 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 LINC00052Q96N35 136 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 YPEL4Q96NS1 127 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 ODF3Q96PU9 254 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 BCL7BQ9BQE9 202 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 LINC00467Q9BRT7 94 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM208Q9BTX3 173 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 PBDC1Q9BVG4 233 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 MIXL1Q9H2W2 232 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 NAGKQ9UJ70 344 aa1.81□□□□□ -2.12
HDAC9-221ENST00000471887 TIMM8BQ9Y5J9 83 aaPredicted RBP1.81□□□□□ -2.12
HDAC9-221ENST00000471887 A0A096LPF7 62 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 LOC389332A0A1B0GUA5 103 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 F5H768 121 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 K7EP13 123 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 DEFB130BP0DP73 79 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 DEFB130AP0DP74 79 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 M6PRP20645 277 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 POLR2GP62487 172 aaKnown RBP eCLIP1.8□□□□□ -2.12
HDAC9-221ENST00000471887 OR2F1Q13607 317 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 PSG3Q16557 428 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM241Q24JQ0 296 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM128Q5BJH2 165 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 CYP2G1PQ6ZSU1 146 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 S100A7AQ86SG5 101 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 CLVS1Q8IUQ0 354 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-221ENST00000471887 UBE2WQ96B02 151 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 PPP1R14BQ96C90 147 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 GNPNAT1Q96EK6 184 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-221ENST00000471887 SLC50A1Q9BRV3 221 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM147Q9BVK8 224 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 SCP2D1Q9UJQ7 156 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 HIGD1AQ9Y241 93 aa1.8□□□□□ -2.12
HDAC9-221ENST00000471887 ZNF706Q9Y5V0 76 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-221ENST00000471887 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 TRAV12-2A0A075B6T6 113 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 G3V3Q6 166 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 HYPMO75409 117 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 SFT2D2O95562 160 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 RLN2P04090 185 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 PRM2P04554 102 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms