RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 A6NJY4 79 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 RBMY1A1P0DJD3 496 aaKnown RBP7.79□□□□□ -1.16
APLF-204ENST00000471727 RBMY1CP0DJD4 496 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 RBMY1FQ15415 496 aaKnown RBP7.79□□□□□ -1.16
APLF-204ENST00000471727 CD300EQ496F6 205 aaPredicted RBP7.79□□□□□ -1.16
APLF-204ENST00000471727 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 LINC01587Q99440 93 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 TSSC4Q9Y5U2 329 aaPredicted RBP7.79□□□□□ -1.16
APLF-204ENST00000471727 PTPN13Q12923 2485 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 CREBBPQ92793 2442 aa7.79□□□□□ -1.16
APLF-204ENST00000471727 TRBV7-3A0A075B6L6 115 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
APLF-204ENST00000471727 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
APLF-204ENST00000471727 CCL24O00175 119 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
APLF-204ENST00000471727 RPL39P62891 51 aaKnown RBP7.78□□□□□ -1.16
APLF-204ENST00000471727 BEAN1Q3B7T3 259 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 TNFRSF18Q9Y5U5 241 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 FBN2P35556 2912 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 GAGE12BA1L429 117 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 ZNF815PA8K554 130 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 RNASE1P07998 156 aaKnown RBP7.78□□□□□ -1.16
APLF-204ENST00000471727 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
APLF-204ENST00000471727 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 ZFYVE26Q68DK2 2539 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 P0DMU3 169 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 C12orf74Q32Q52 190 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 STHQ8IWL8 128 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
APLF-204ENST00000471727 VCX2Q9H322 139 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 NHP2Q9NX24 153 aaKnown RBP7.77□□□□□ -1.17
APLF-204ENST00000471727 SPCS1Q9Y6A9 102 aa7.77□□□□□ -1.17
APLF-204ENST00000471727 UTP20O75691 2785 aaKnown RBP7.77□□□□□ -1.17
APLF-204ENST00000471727 CELSR2Q9HCU4 2923 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 J3QKU1 62 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 RS1O15537 224 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 TMEM170BQ5T4T1 132 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 SCGB1D4Q6XE38 83 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 FAM110AQ9BQ89 295 aa7.76□□□□□ -1.17
APLF-204ENST00000471727 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 HTN1P15515 57 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 CFAP126Q5VTH2 177 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 C11orf72Q8NBR9 251 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 YAE1D1Q9NRH1 226 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
APLF-204ENST00000471727 CELSR1Q9NYQ6 3014 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 POLQO75417 2590 aa7.75□□□□□ -1.17
APLF-204ENST00000471727 IGLL5B9A064 214 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 K7ERU9 68 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 LEPROTO15243 131 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 ZNF418Q8TF45 676 aaPredicted RBP7.74□□□□□ -1.17
APLF-204ENST00000471727 PLEKHB2Q96CS7 222 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 ESM1Q9NQ30 184 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 SPANXA1Q9NS26 97 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 CD28P10747 220 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 LGALS3P17931 250 aaKnown RBP7.74□□□□□ -1.17
APLF-204ENST00000471727 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
APLF-204ENST00000471727 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 ZNRF2Q8NHG8 242 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 AMELXQ99217 191 aa7.74□□□□□ -1.17
APLF-204ENST00000471727 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 J3QQQ9 107 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 CIDEAO60543 219 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 NDUFA7O95182 113 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 PLA2G2AP14555 144 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 LINC01006Q8NI28 216 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 RNASE8Q8TDE3 154 aaKnown RBP7.73□□□□□ -1.17
APLF-204ENST00000471727 ZNF479Q96JC4 524 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
APLF-204ENST00000471727 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
APLF-204ENST00000471727 A0A0J9YY99 117 aa7.72□□□□□ -1.17
APLF-204ENST00000471727 SMAGPQ0VAQ4 97 aa7.72□□□□□ -1.17
APLF-204ENST00000471727 RRN3P1Q2M238 152 aa7.72□□□□□ -1.17
APLF-204ENST00000471727 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
APLF-204ENST00000471727 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
APLF-204ENST00000471727 CITED2Q99967 270 aaPredicted RBP7.72□□□□□ -1.17
APLF-204ENST00000471727 IGHV3-73A0A0B4J1V6 119 aa7.71□□□□□ -1.17
APLF-204ENST00000471727 TRBV10-1A0A0K0K1A3 114 aa7.71□□□□□ -1.17
APLF-204ENST00000471727 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.17
APLF-204ENST00000471727 COTL1Q14019 142 aa7.71□□□□□ -1.17
APLF-204ENST00000471727 TIMM21Q9BVV7 248 aa7.71□□□□□ -1.17
APLF-204ENST00000471727 A0A1W2PRX2 142 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 K7ERJ3 54 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 ZNF22P17026 224 aaPredicted RBP7.7□□□□□ -1.18
APLF-204ENST00000471727 UBE2D1P51668 147 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 EMP1P54849 157 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 HILS1P60008 231 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 RBX1P62877 108 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 LYRM7Q5U5X0 104 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 C1orf158Q8N1D5 194 aa7.7□□□□□ -1.18
APLF-204ENST00000471727 TMEM263Q8WUH6 116 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms