RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 HRCT1Q6UXD1 115 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 ITPR3Q14573 2671 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 NBPF19A0A087WUL8 3843 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 UHRF1BP1LA0JNW5 1464 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 FAM92AA1XBS5 289 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 YPEL1O60688 119 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 RBP4P02753 201 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 COX6B1P14854 86 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 BAGE3Q86Y29 109 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 STOML2Q9UJZ1 356 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 TRAPPC2LQ9UL33 140 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 ZMYM4Q5VZL5 1548 aa-1.42□□□□□ -2.64
COMMD3-209ENST00000471350 PTPRMP28827 1452 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 WDR7Q9Y4E6 1490 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 E7EQ34 232 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 H0YJX3 145 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 TCRAP04437 139 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 HAMPP81172 84 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 STX12Q86Y82 276 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 AKAP11Q9UKA4 1901 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 HECTD1Q9ULT8 2610 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 IQSEC2Q5JU85 1478 aa-1.43□□□□□ -2.64
COMMD3-209ENST00000471350 IBTKQ9P2D0 1353 aaPredicted RBP-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 MED23Q9ULK4 1368 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 J3QLW9 94 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 SPRR1BP22528 89 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 THEM6Q8WUY1 208 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 FXYD6Q9H0Q3 95 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 ERCC6L2Q5T890 1561 aa-1.44□□□□□ -2.64
COMMD3-209ENST00000471350 J3KT08 172 aa-1.45□□□□□ -2.64
COMMD3-209ENST00000471350 POLR2HP52434 150 aaKnown RBP-1.45□□□□□ -2.64
COMMD3-209ENST00000471350 LAMC1P11047 1609 aa-1.45□□□□□ -2.64
COMMD3-209ENST00000471350 NUP210Q8TEM1 1887 aaPredicted RBP-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 DNAJC13O75165 2243 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 I3L2K1 104 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 TMEM78Q5T7P6 136 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 TMEM91Q6ZNR0 172 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 ATP11AUNQ6ZP68 121 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 CCDC115Q96NT0 180 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 CALML5Q9NZT1 146 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 TACC2O95359 2948 aa-1.46□□□□□ -2.64
COMMD3-209ENST00000471350 EIF3AQ14152 1382 aaKnown RBP-1.47□□□□□ -2.64
COMMD3-209ENST00000471350 SMIM24O75264 130 aa-1.47□□□□□ -2.64
COMMD3-209ENST00000471350 BOLA2Q9H3K6 86 aa-1.47□□□□□ -2.64
COMMD3-209ENST00000471350 MUC17Q685J3 4493 aa-1.47□□□□□ -2.64
COMMD3-209ENST00000471350 BIRC6Q9NR09 4857 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 A0A1W2PRE2 83 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 RPL7L1Q6DKI1 246 aaKnown RBP-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 CHMP6Q96FZ7 201 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 SDF2Q99470 211 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 RPRMQ9NS64 109 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 DNAJC15Q9Y5T4 150 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 MYH1P12882 1939 aa-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 FASNP49327 2511 aaKnown RBP-1.48□□□□□ -2.65
COMMD3-209ENST00000471350 NRXN2Q9P2S2 1712 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 CASZ1Q86V15 1759 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 PHIPQ8WWQ0 1821 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 IFNA17P01571 189 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 OR9Q1Q8NGQ5 310 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 SMIM4Q8WVI0 70 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 ATPIF1Q9UII2 106 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 LRP6O75581 1613 aa-1.49□□□□□ -2.65
COMMD3-209ENST00000471350 MYO18BQ8IUG5 2567 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 PLXNA2O75051 1894 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 SYNMO15061 1565 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 BICRAQ9NZM4 1560 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 A6NIN4 97 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 DPM2O94777 84 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 TNFP01375 233 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 HLA-DRB4P13762 266 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 PI4KAP42356 2102 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 UBE2D1P51668 147 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 MAFIPQ8WZ33 124 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 MAGOHBQ96A72 148 aaKnown RBP-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 NDUFA12Q9UI09 145 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 HLA-DRB4X5D2U9 266 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 KIF13AQ9H1H9 1805 aa-1.5□□□□□ -2.65
COMMD3-209ENST00000471350 PKHD1L1Q86WI1 4243 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 PAEPP09466 180 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 RPL7P18124 248 aaKnown RBP-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 CLLU1Q5K131 121 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 TRIQKQ629K1 86 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 BANF2Q9H503 90 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 MYH2Q9UKX2 1941 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 KDM5CP41229 1560 aa-1.51□□□□□ -2.65
COMMD3-209ENST00000471350 SPANXN1Q5VSR9 72 aa-1.52□□□□□ -2.65
COMMD3-209ENST00000471350 LINC01545Q5VT33 79 aa-1.52□□□□□ -2.65
COMMD3-209ENST00000471350 IFT172Q9UG01 1749 aa-1.52□□□□□ -2.65
COMMD3-209ENST00000471350 CLPSL1A2RUU4 121 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 SIPA1L3O60292 1781 aaPredicted RBP-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 PKD1P98161 4303 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 ROCK1Q13464 1354 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 FER1L6Q2WGJ9 1857 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 C9orf116Q5BN46 136 aaPredicted RBP-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 PPP1R2P3Q6NXS1 205 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 OR8I2Q8N0Y5 310 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 TMEM35BQ8NCS4 154 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 C10orf82Q8WW14 230 aa-1.53□□□□□ -2.65
COMMD3-209ENST00000471350 SPG11Q96JI7 2443 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms