RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 FCER1GP30273 86 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
VPS52-216ENST00000471309 LAGE3Q14657 143 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 ORMDL2Q53FV1 153 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 LINC00612Q8N6U2 182 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 IGHV3-73A0A0B4J1V6 119 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 G3V4G9 280 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 VCYO14598 125 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 BTF3P20290 206 aaKnown RBP6.71□□□□□ -1.34
VPS52-216ENST00000471309 Q8N976 141 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 RNF183Q96D59 192 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 C18orf15Q96N68 181 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 VWFP04275 2813 aa6.71□□□□□ -1.34
VPS52-216ENST00000471309 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 GAGE12BA1L429 117 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 TCAPO15273 167 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 GAGE7O76087 117 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 SCGB1D1O95968 90 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 GAGE12FP0CL80 117 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 GAGE12GP0CL81 117 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 GAGE12IP0CL82 117 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 MIFP14174 115 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 LINC00173Q6ZV60 143 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 OR11H2Q8NH07 326 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 DNAJC30Q96LL9 226 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 KIR2DL4Q99706 377 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 MAP1LC3CQ9BXW4 147 aa6.7□□□□□ -1.34
VPS52-216ENST00000471309 TRGV2A0A075B6R0 118 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 KPRPQ5T749 579 aaPredicted RBP6.69□□□□□ -1.34
VPS52-216ENST00000471309 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 Q6ZSN1 163 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 SPATA12Q7Z6I5 190 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 Q8NAQ8 132 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
VPS52-216ENST00000471309 IGHV4-28A0A0C4DH34 117 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 C20orf202A1L168 122 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 I3L3M4 83 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 K7EQD1 137 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 NUDT3O95989 172 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 P0DMU3 169 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 G0S2P27469 103 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 EMP1P54849 157 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 RHOHQ15669 191 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 TEX43Q6ZNM6 134 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 NEGR1Q7Z3B1 354 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
VPS52-216ENST00000471309 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 A6NJY4 79 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 ATP5LO75964 103 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 TSHBP01222 138 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 S100A12P80511 92 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 C2orf66Q6UXQ4 117 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
VPS52-216ENST00000471309 J3QL48 77 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 LINC01545Q5VT33 79 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 CYSLTR1Q9Y271 337 aa6.66□□□□□ -1.34
VPS52-216ENST00000471309 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 TRGV4A0A0C4DH28 118 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 TEX48A0A1B0GUV7 120 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 DEFB130BP0DP73 79 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 DEFB130AP0DP74 79 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 RPL36AP83881 106 aaKnown RBP6.65□□□□□ -1.34
VPS52-216ENST00000471309 FHL2Q14192 279 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 LGALS9CQ6DKI2 356 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 RPL36ALQ969Q0 106 aaKnown RBP6.65□□□□□ -1.34
VPS52-216ENST00000471309 PGPEP1Q9NXJ5 209 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 Q9UF83 564 aa6.65□□□□□ -1.34
VPS52-216ENST00000471309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
VPS52-216ENST00000471309 SPART-AS1P0CW21 52 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 UBE2D3P61077 147 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 UBE2D2P62837 147 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 ERASQ7Z444 233 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
VPS52-216ENST00000471309 C20orf203Q8NBC4 194 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 SCGB3A1Q96QR1 104 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 VAMP8Q9BV40 100 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
VPS52-216ENST00000471309 ANK2Q01484 3957 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 NOTCH3Q9UM47 2321 aa6.64□□□□□ -1.35
VPS52-216ENST00000471309 H0Y8G0 127 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 DEFB4AO15263 64 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 COTL1Q14019 142 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms