RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 RASL10AQ92737 203 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 C16orf74Q96GX8 76 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 BAHCC1Q9P281 2608 aa4.39□□□□□ -1.71
SMNDC1-204ENST00000471297 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 C2CD3Q4AC94 2353 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 NSD1Q96L73 2696 aaPredicted RBP4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 A8MZ25 164 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 K7EMI3 77 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 RHODO00212 210 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 RS1O15537 224 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 NCR2O95944 276 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 SMIM6P0DI80 62 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 AZU1P20160 251 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 IFI27P40305 119 aaPredicted RBP4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 LINC00315P59091 139 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 RPL32P62910 135 aaKnown RBP4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 EGFEM1PQ0D2K5 195 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 DAZ2Q13117 558 aaKnown RBP4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 NRACQ8N912 160 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 OVOL2Q9BRP0 275 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 JPT2Q9H910 190 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 EDA2RQ9HAV5 297 aa4.38□□□□□ -1.71
SMNDC1-204ENST00000471297 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 H7C1H1 209 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 PRM2P04554 102 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 GATA1P15976 413 aaPredicted RBP4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 G0S2P27469 103 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 JOSD1Q15040 202 aaPredicted RBP4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 ST20Q9HBF5 79 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 HSPB8Q9UJY1 196 aa4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 FLNBO75369 2602 aaKnown RBP4.37□□□□□ -1.71
SMNDC1-204ENST00000471297 AGRNO00468 2067 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 TRGV1A0A0A0MS02 117 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 TRAV26-2A0A0B4J265 109 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 TRAV4A0A0B4J268 109 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 LINC01549A6NIU2 74 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 M0QY20 66 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 VCYO14598 125 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 TCAPO15273 167 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 IGHV4-30-4P0DP06 118 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 FCER1GP30273 86 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 LAGE3Q14657 143 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 ZNF56Q15929 161 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 CFAP126Q5VTH2 177 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 UFSP1Q6NVU6 142 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 OR4C5Q8NGB2 326 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 DNAJC30Q96LL9 226 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 SMIM2Q9BVW6 85 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 SORL1Q92673 2214 aa4.36□□□□□ -1.71
SMNDC1-204ENST00000471297 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 PLAC8L1A1L4L8 177 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 HBDP02042 147 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 C12orf57Q99622 126 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 MAP1LC3CQ9BXW4 147 aa4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 NOP10Q9NPE3 64 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 MRPL16Q9NX20 251 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
SMNDC1-204ENST00000471297 WNK1Q9H4A3 2382 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 I3L3M4 83 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 IGHV3-53P01767 116 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 MIFP14174 115 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 PCP4P48539 62 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 KRTDAPP60985 99 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 S100A12P80511 92 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 OR11H2Q8NH07 326 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 RNF183Q96D59 192 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 KIR2DL4Q99706 377 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 TMEM70Q9BUB7 260 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 TNFRSF18Q9Y5U5 241 aa4.34□□□□□ -1.71
SMNDC1-204ENST00000471297 MUC4Q99102 2169 aa4.34□□□□□ -1.72
SMNDC1-204ENST00000471297 TRGV2A0A075B6R0 118 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 A0A096LNJ9 63 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 TRBV10-1A0A0K0K1A3 114 aa4.33□□□□□ -1.72
SMNDC1-204ENST00000471297 C20orf202A1L168 122 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms