RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TRBV7-6A0A0J9YX20 115 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 RPL37AP8A6NKH3 93 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 LY6G6CO95867 125 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 SPATA12Q7Z6I5 190 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 PLAC8L1A1L4L8 177 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 NDUFC1O43677 76 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 CSDC2Q9Y534 153 aaKnown RBP5.26□□□□□ -1.57
BRCA1-210ENST00000471181 CHD5Q8TDI0 1954 aa5.26□□□□□ -1.57
BRCA1-210ENST00000471181 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 FOXL2NBQ6ZUU3 175 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 UNC13CQ8NB66 2214 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 TDRG1Q3Y452 100 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 IGHV7-81A0A0B4J1V7 117 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 NUPR1O60356 82 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 EP300Q09472 2414 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-210ENST00000471181 Q6Q795 121 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 CTSZQ9UBR2 303 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 ODF3L1Q8IXM7 274 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 CELA1Q9UNI1 258 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 GVINP1Q7Z2Y8 2422 aa5.25□□□□□ -1.57
BRCA1-210ENST00000471181 A6NDX4 124 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 GRNP28799 593 aaKnown RBP5.24□□□□□ -1.57
BRCA1-210ENST00000471181 NDUFA7O95182 113 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 BEAN1Q3B7T3 259 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 ESPL1Q14674 2120 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 ZNF503-AS2A6NEH8 195 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 I3L2K1 104 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 TP53TG3Q9ULZ0 132 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 TRIP12Q14669 1992 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-210ENST00000471181 EBI3Q14213 229 aa5.24□□□□□ -1.57
BRCA1-210ENST00000471181 CSRP3P50461 194 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 Q6ZTI0 123 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 C20orf203Q8NBC4 194 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 MAP6D1Q9H9H5 199 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 AHCTF1Q8WYP5 2266 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 C5orf56Q8N8D9 126 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 YLPM1P49750 1951 aaKnown RBP5.23□□□□□ -1.57
BRCA1-210ENST00000471181 MPDZO75970 2070 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 ODF1Q14990 250 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
BRCA1-210ENST00000471181 LINC00322Q6ZN03 302 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-210ENST00000471181 LINC00467Q9BRT7 94 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 PSPHP1O15172 72 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 DHRS4-AS1Q9P1J3 65 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 LRRK1Q38SD2 2015 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 MYO7BQ6PIF6 2116 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 KIAA1217Q5T5P2 1943 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 IGLV11-55A0A075B6I3 123 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 SPTBP11277 2137 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 K7EIM0 57 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 C10orf91Q5T1B1 145 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 Q6ZQY7 126 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 SPRNQ5BIV9 151 aa5.22□□□□□ -1.57
BRCA1-210ENST00000471181 ZDBF2Q9HCK1 2354 aa5.21□□□□□ -1.57
BRCA1-210ENST00000471181 C10orf25Q5T742 122 aa5.21□□□□□ -1.57
BRCA1-210ENST00000471181 LINC00526Q96FQ7 95 aa5.21□□□□□ -1.57
BRCA1-210ENST00000471181 DOCK4Q8N1I0 1966 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 DIDO1Q9BTC0 2240 aaKnown RBP5.21□□□□□ -1.58
BRCA1-210ENST00000471181 IGF1P05019 195 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 TMEM89A2RUT3 159 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 CCDC179H3BU77 68 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 LINC00694P0DN24 101 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 LINC00208Q96KT6 92 aa5.21□□□□□ -1.58
BRCA1-210ENST00000471181 SPTBN2O15020 2390 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 KMT2EQ8IZD2 1858 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 TRBV6-5A0A0K0K1A5 114 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 PRLHP81277 87 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 MRPS12O15235 138 aaKnown RBP5.2□□□□□ -1.58
BRCA1-210ENST00000471181 TRIAP1O43715 76 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 INSL3P51460 131 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 CABIN1Q9Y6J0 2220 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 LINC00308Q8TCZ7 52 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 CRYGAP11844 174 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 CFAP126Q5VTH2 177 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 SVILO95425 2214 aa5.2□□□□□ -1.58
BRCA1-210ENST00000471181 PATE2Q6UY27 113 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 SPRY4Q9C004 299 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 K7EMT4 169 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-210ENST00000471181 IGLV1-44P01699 117 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 M0QXV9 152 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 M0R378 163 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 FAM215AQ9Y5M1 114 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 PDCD11Q14690 1871 aaKnown RBP5.19□□□□□ -1.58
BRCA1-210ENST00000471181 MCM3APO60318 1980 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 A0A0J9YX75 114 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 CRIPAKQ8N1N5 446 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 LINC00482Q8N8I6 264 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 CASP8AP2Q9UKL3 1982 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
BRCA1-210ENST00000471181 IBA57-AS1B1ANH7 110 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms