RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 NXT2Q9NPJ8 142 aaKnown RBP6.94□□□□□ -1.3
CCM2-204ENST00000470837 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 TCAPO15273 167 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 GATA1P15976 413 aaPredicted RBP6.93□□□□□ -1.3
CCM2-204ENST00000470837 S100A2P29034 98 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
CCM2-204ENST00000470837 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
CCM2-204ENST00000470837 KIR2DL4Q99706 377 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 EDA2RQ9HAV5 297 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
CCM2-204ENST00000470837 NBEAL2Q6ZNJ1 2754 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 VCYO14598 125 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 PAX4O43316 350 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 HSBP1O75506 76 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 LINC00614P0C842 121 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 FCER1GP30273 86 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 FHL2Q14192 279 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 SLC25A29Q8N8R3 303 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 NRACQ8N912 160 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
CCM2-204ENST00000470837 SMIM2Q9BVW6 85 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
CCM2-204ENST00000470837 MUC4Q99102 2169 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 G0S2P27469 103 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 IFI27P40305 119 aaPredicted RBP6.91□□□□□ -1.3
CCM2-204ENST00000470837 Q6ZSN1 163 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 NIT1Q86X76 327 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 Q8N8P6 123 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 ZNRF2Q8NHG8 242 aa6.91□□□□□ -1.3
CCM2-204ENST00000470837 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 I3L3M4 83 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 K7EMI3 77 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 SERF1AO75920 110 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 P0DMU3 169 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 FAM231AP0DMU4 169 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 FAM231CP0DMU5 169 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 CRYBA4P53673 196 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 NANOS2P60321 138 aaKnown RBP6.9□□□□□ -1.3
CCM2-204ENST00000470837 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
CCM2-204ENST00000470837 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.3
CCM2-204ENST00000470837 GAGE1Q13065 139 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 GAGE4Q13068 117 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 GAGE5Q13069 117 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 ORMDL2Q53FV1 153 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
CCM2-204ENST00000470837 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
CCM2-204ENST00000470837 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
CCM2-204ENST00000470837 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 A0A0J9YY99 117 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 PRSS47A8MTI9 375 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 GYPEP15421 78 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 HOXA5P20719 270 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 COTL1Q14019 142 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 LAGE3Q14657 143 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 COA6Q5JTJ3 125 aaKnown RBP6.89□□□□□ -1.31
CCM2-204ENST00000470837 Q6ZTC4 211 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 SH2D6Q7Z4S9 175 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
CCM2-204ENST00000470837 DNHD1Q96M86 4753 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 NUDT3O95989 172 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 AMTP48728 403 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
CCM2-204ENST00000470837 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
CCM2-204ENST00000470837 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
CCM2-204ENST00000470837 LINC01549A6NIU2 74 aa6.87□□□□□ -1.31
CCM2-204ENST00000470837 BTF3P20290 206 aaKnown RBP6.87□□□□□ -1.31
CCM2-204ENST00000470837 NEGR1Q7Z3B1 354 aa6.87□□□□□ -1.31
CCM2-204ENST00000470837 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
CCM2-204ENST00000470837 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
CCM2-204ENST00000470837 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 H3BNG1 76 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 HBDP02042 147 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 ESDP10768 282 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 UBE2D3P61077 147 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 UBE2D2P62837 147 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 HSPB8Q9UJY1 196 aa6.86□□□□□ -1.31
CCM2-204ENST00000470837 IGLV2-18A0A075B6J9 118 aa6.85□□□□□ -1.31
CCM2-204ENST00000470837 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
CCM2-204ENST00000470837 UBE2L6O14933 153 aa6.85□□□□□ -1.31
CCM2-204ENST00000470837 HIST3H2BBQ8N257 126 aa6.85□□□□□ -1.31
CCM2-204ENST00000470837 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
CCM2-204ENST00000470837 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
CCM2-204ENST00000470837 IGHV1-24A0A0C4DH33 117 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms