RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 LYSTQ99698 3801 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 RYR2Q92736 4967 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 C7orf71A4D174 169 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 H3BVH4 76 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 SPINK4O60575 86 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 IFNA1P01562 189 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 TYMSP04818 313 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 GPX1P07203 203 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 CRISP2P16562 243 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 CDKN1BP46527 198 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 CSN1S1P47710 185 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 FOXA3P55318 350 aaPredicted RBP2.54□□□□□ -2
COL9A1-206ENST00000470652 UBE2G1P62253 170 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 RPL23P62829 140 aaKnown RBP2.54□□□□□ -2
COL9A1-206ENST00000470652 ADIRFQ15847 76 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 TMEM78Q5T7P6 136 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 LINC01551Q86U37 167 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 TMEM183AQ8IXX5 376 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 Q8NAQ8 132 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 OR11H2Q8NH07 326 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 DEFB104AQ8WTQ1 72 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 LINC01587Q99440 93 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 SMIM7Q9BQ49 75 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 MRPL16Q9NX20 251 aaKnown RBP2.54□□□□□ -2
COL9A1-206ENST00000470652 KLK12Q9UKR0 248 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 PRELID1Q9Y255 219 aa2.54□□□□□ -2
COL9A1-206ENST00000470652 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 IGHV3-73A0A0B4J1V6 119 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 TMEM218A2RU14 115 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 C19orf71A6NCJ1 209 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 KRBOX1C9JBD0 128 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 F8W036 122 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 INSP01308 110 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 IGHV3-53P01767 116 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 ORM1P02763 201 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2
COL9A1-206ENST00000470652 S100A7P31151 101 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 LEPP41159 167 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 GNG4P50150 75 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 PEA15Q15121 130 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 ZNF705AQ6ZN79 300 aaPredicted RBP2.53□□□□□ -2
COL9A1-206ENST00000470652 Q6ZTI0 123 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 S100A7AQ86SG5 101 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 C11orf72Q8NBR9 251 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 HIST1H2BAQ96A08 127 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 ISOC2Q96AB3 205 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 FMC1Q96HJ9 113 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 TM2D3Q9BRN9 247 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 TPPP3Q9BW30 176 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 SAMD10Q9BYL1 202 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 RYR3Q15413 4870 aa2.53□□□□□ -2
COL9A1-206ENST00000470652 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
COL9A1-206ENST00000470652 IGHV1OR15-1A0A075B7D0 117 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TRBV6-1A0A0K0K1D8 114 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 RBAKDNA6NC62 111 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 C9JCJ5 164 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM250H0YL14 139 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 PDE6DO43924 150 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 APOC3P02656 99 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 HTN3P15516 51 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 APOC4P55056 127 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM241Q24JQ0 296 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 FAM74A3Q4VXF1 159 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 SMUG1Q53HV7 270 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 Q6AWC8 147 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 ZFAND6Q6FIF0 208 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 OR2D3Q8NGH3 330 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 OR10AG1Q8NH19 301 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 C7orf33Q8WU49 177 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM101Q96IK0 257 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 PGLYRP4Q96LB8 373 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 B9D2Q9BPU9 175 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM208Q9BTX3 173 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 NOP10Q9NPE3 64 aaKnown RBP2.52□□□□□ -2.01
COL9A1-206ENST00000470652 V9GYV3 84 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TENM2Q9NT68 2774 aa2.52□□□□□ -2.01
COL9A1-206ENST00000470652 TRAV21A0A0B4J279 112 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 A0A0J9YXY3 114 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 LOC100131303A0A0U1RQF7 123 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM189A5PLL7 270 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 B4DEV8 164 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 K7EQM0 130 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 M0R381 172 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 PFN1P07737 140 aaKnown RBP2.51□□□□□ -2.01
COL9A1-206ENST00000470652 ARMS2P0C7Q2 107 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 P0DMU3 169 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 FAM231AP0DMU4 169 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 FAM231CP0DMU5 169 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 DEFB130BP0DP73 79 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 DEFB130AP0DP74 79 aa2.51□□□□□ -2.01
COL9A1-206ENST00000470652 TAS2R60P59551 318 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms