RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CRIP2P52943 208 aaPredicted RBP4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 MIAQ16674 131 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 MRPL55Q7Z7F7 128 aaKnown RBP4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 SNRNP200O75643 2136 aaKnown RBP4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 CTSGP08311 255 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 RUSC1-AS1Q66K80 236 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 COX8CQ7Z4L0 72 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 DYNAPQ8N1N2 210 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 F5H768 121 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 UQCRQO14949 82 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 HIST2H2BDQ6DRA6 164 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 Q8TAT8 98 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 SIRPDQ9H106 197 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 COL4A4P53420 1690 aaPredicted RBP4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV4OR15-8A0A075B7B6 117 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 A0A087WW49 117 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-35A0A0C4DH35 117 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 RBX1P62877 108 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNF524Q96C55 264 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNRD1Q9P1U0 126 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 IGLC6P0CF74 106 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 Q8N9W7 124 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 SND1-IT1Q9HBX3 110 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 ANKRD17O75179 2603 aaKnown RBP4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 IGLV2-23P01705 113 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 PSMB8P28062 276 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 MDFIQ99750 246 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNF106Q9H2Y7 1883 aaKnown RBP4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 VWA8A3KMH1 1905 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 NREPQ16612 68 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 HEATR5BQ9P2D3 2071 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 TEX22C9J3V5 150 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 SUMO4Q6EEV6 95 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 C8orf49Q96NF6 230 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 LINC00474Q9P2X8 69 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 U3KQE9 123 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 FREM3P0C091 2139 aa4.72□□□□□ -1.65
CCDC144A-212ENST00000470068 MIFP14174 115 aa4.71□□□□□ -1.65
CCDC144A-212ENST00000470068 MBD6Q96DN6 1003 aa4.71□□□□□ -1.65
CCDC144A-212ENST00000470068 B9D2Q9BPU9 175 aa4.71□□□□□ -1.65
CCDC144A-212ENST00000470068 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.65
CCDC144A-212ENST00000470068 K7EN84 100 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 SPINK13Q1W4C9 94 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 MLST8Q9BVC4 326 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 CNFNQ9BYD5 112 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 MYOFQ9NZM1 2061 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 Q9H8V8 135 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 ADAMTS9Q9P2N4 1935 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 A0A087WWL8 130 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 FOXI1Q12951 378 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 PPDPFQ9H3Y8 114 aa4.71□□□□□ -1.66
CCDC144A-212ENST00000470068 IGHV4-61A0A0C4DH41 118 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 SEC61GP60059 68 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 C2orf70A6NJV1 201 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 ETDBQ3ZM63 59 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 G3V4G9 280 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 CRYGBP07316 175 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 COX7BP24311 80 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 CEP350Q5VT06 3117 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 LTBP2Q14767 1821 aa4.7□□□□□ -1.66
CCDC144A-212ENST00000470068 ANGP03950 147 aaKnown RBP4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 HAMPP81172 84 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 TMEM219Q86XT9 240 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 RNASE8Q8TDE3 154 aaKnown RBP4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 S4R3C0 116 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 K7ERS5 55 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 UBE2AP49459 152 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 TNRC6AQ8NDV7 1962 aaKnown RBP4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 NXPH4O95158 308 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 BAALCQ8WXS3 180 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 TNCP24821 2201 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
CCDC144A-212ENST00000470068 TRBV27A0A0K0K1C4 114 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 RS1O15537 224 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 NDUFA7O95182 113 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 IGHV3-53P01767 116 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 RPL35AP18077 110 aaKnown RBP4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 CYYR1Q96J86 154 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 NDPQ00604 133 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 PATE2Q6UY27 113 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 XCL2Q9UBD3 114 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 NHLRC4P0CG21 123 aaPredicted RBP4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 CTSZQ9UBR2 303 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 K7EQG2 157 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 PFN2P35080 140 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 WDR81Q562E7 1941 aa4.68□□□□□ -1.66
CCDC144A-212ENST00000470068 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.67□□□□□ -1.66
CCDC144A-212ENST00000470068 CSDC2Q9Y534 153 aaKnown RBP4.67□□□□□ -1.66
CCDC144A-212ENST00000470068 CFAP46Q8IYW2 2715 aa4.67□□□□□ -1.66
CCDC144A-212ENST00000470068 SMKR1H3BMG3 65 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms