RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NRGNQ92686 78 aa10.03□□□□□ -0.8
BRCA1-209ENST00000470026 DOPEY1Q5JWR5 2465 aa10.03□□□□□ -0.8
BRCA1-209ENST00000470026 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-209ENST00000470026 PYGO1Q9Y3Y4 419 aa10.03□□□□□ -0.8
BRCA1-209ENST00000470026 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 SCGB1A1P11684 91 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-209ENST00000470026 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
BRCA1-209ENST00000470026 PIK3CD-AS1Q5SR53 167 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 TSSC4Q9Y5U2 329 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-209ENST00000470026 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.81
BRCA1-209ENST00000470026 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 CRYBA4P53673 196 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 Q5PR19 223 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 RHODO00212 210 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 APOMO95445 188 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 MTURNQ8N3F0 131 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 C10orf126Q8N4M7 172 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 PTH2Q96A98 100 aa10.01□□□□□ -0.81
BRCA1-209ENST00000470026 TGFAP01135 160 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 SIGMAR1Q99720 223 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 PKD1L2Q7Z442 2459 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 SPG11Q96JI7 2443 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 DUX5Q96PT3 197 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
BRCA1-209ENST00000470026 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
BRCA1-209ENST00000470026 H3BMM0 161 aa9.99□□□□□ -0.81
BRCA1-209ENST00000470026 INSL3P51460 131 aa9.99□□□□□ -0.81
BRCA1-209ENST00000470026 Q8N2B8 174 aa9.99□□□□□ -0.81
BRCA1-209ENST00000470026 VCX2Q9H322 139 aa9.99□□□□□ -0.81
BRCA1-209ENST00000470026 RBMY1BA6NDE4 496 aaKnown RBP9.98□□□□□ -0.81
BRCA1-209ENST00000470026 RBMY1EA6NEQ0 496 aaKnown RBP9.98□□□□□ -0.81
BRCA1-209ENST00000470026 RBMY1DP0C7P1 496 aaKnown RBP9.98□□□□□ -0.81
BRCA1-209ENST00000470026 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 LOC107984156A0A0G2JMH3 177 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 KNCNA6PVL3 124 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 EIF4EBP3O60516 100 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-209ENST00000470026 AZU1P20160 251 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 PSMB2P49721 201 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
BRCA1-209ENST00000470026 FOXI1Q12951 378 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 ARL17AQ8IVW1 177 aa9.98□□□□□ -0.81
BRCA1-209ENST00000470026 A8MWV9 139 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 M0R2P5 195 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 COL12A1Q99715 3063 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 A0A0B4J2C4 111 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 TCL1BO95988 128 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 DEFB131AP59861 70 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
BRCA1-209ENST00000470026 IGHV4-31P0DP07 118 aa9.96□□□□□ -0.82
BRCA1-209ENST00000470026 SLURP1P55000 103 aa9.96□□□□□ -0.82
BRCA1-209ENST00000470026 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
BRCA1-209ENST00000470026 A4D1N5 150 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 PROK1P58294 105 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 NACAE9PAV3 2078 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 C18orf65Q6ZTR6 163 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 MAPK1IP1LQ8NDC0 245 aa9.95□□□□□ -0.82
BRCA1-209ENST00000470026 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 BEX4Q9NWD9 120 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-209ENST00000470026 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-209ENST00000470026 SORL1Q92673 2214 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 M0QXV9 152 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV3-30-3P0DP02 117 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 CD28P10747 220 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 ZNF415Q09FC8 603 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 LITAFQ99732 161 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 TNFRSF18Q9Y5U5 241 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 CR1P17927 2039 aa9.94□□□□□ -0.82
BRCA1-209ENST00000470026 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 BEAN1Q3B7T3 259 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 Q6ZSN1 163 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 TEN1Q86WV5 123 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 TMEM61Q8N0U2 210 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 DUX3Q96PT4 197 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 PEMTQ9UBM1 199 aa9.93□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 DEFB136Q30KP8 78 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 C4orf3Q8WVX3 66 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 PRRC2AP48634 2157 aaKnown RBP9.92□□□□□ -0.82
BRCA1-209ENST00000470026 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV1-58A0A0C4DH39 117 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms