RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LINC00614P0C842 121 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 DEFB130BP0DP73 79 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 DEFB130AP0DP74 79 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 NDUFA6P56556 154 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 DAD1P61803 113 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
TRAF4-208ENST00000469529 ZNF56Q15929 161 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 NIT1Q86X76 327 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
TRAF4-208ENST00000469529 MAP1LC3AQ9H492 121 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 RETNQ9HD89 108 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 VCYO14598 125 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 DEFB4AO15263 64 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 NCR2O95944 276 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 C12orf74Q32Q52 190 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 Q8N8P6 123 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 URB1-AS1Q96HZ7 61 aa9□□□□□ -0.97
TRAF4-208ENST00000469529 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 TCAPO15273 167 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 ATP5G1P05496 136 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 PMCHP20382 165 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 LINC00310P59036 64 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 SLC25A29Q8N8R3 303 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 PRSS3P2Q8NHM4 247 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
TRAF4-208ENST00000469529 TMEM70Q9BUB7 260 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 PRO0255Q9UI72 69 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 HHLA3Q9XRX5 114 aa8.99□□□□□ -0.97
TRAF4-208ENST00000469529 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 K7EQD1 137 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 SNRPEP62304 92 aaKnown RBP8.98□□□□□ -0.97
TRAF4-208ENST00000469529 RHOHQ15669 191 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 NEXN-AS1Q8NBZ9 246 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
TRAF4-208ENST00000469529 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 A0A0J9YWU9 116 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 H3BNG1 76 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 SERF1AO75920 110 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
TRAF4-208ENST00000469529 CRYBA4P53673 196 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 PRADC1Q9BSG0 188 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
TRAF4-208ENST00000469529 NUPR1O60356 82 aa8.96□□□□□ -0.98
TRAF4-208ENST00000469529 RPL36AP83881 106 aaKnown RBP8.96□□□□□ -0.98
TRAF4-208ENST00000469529 RPL36ALQ969Q0 106 aaKnown RBP8.96□□□□□ -0.98
TRAF4-208ENST00000469529 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.98
TRAF4-208ENST00000469529 HUWE1Q7Z6Z7 4374 aaKnown RBP8.95□□□□□ -0.98
TRAF4-208ENST00000469529 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 I3L3M4 83 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 LINC00694P0DN24 101 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 G0S2P27469 103 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 UBE2D3P61077 147 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 UBE2D2P62837 147 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
TRAF4-208ENST00000469529 HIST3H2BBQ8N257 126 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
TRAF4-208ENST00000469529 Q9UF83 564 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 COL7A1Q02388 2944 aa8.95□□□□□ -0.98
TRAF4-208ENST00000469529 HSBP1O75506 76 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 P0DMU3 169 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 FAM231AP0DMU4 169 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 FAM231CP0DMU5 169 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 LAGE3Q14657 143 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 ORMDL2Q53FV1 153 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
TRAF4-208ENST00000469529 SH2D6Q7Z4S9 175 aa8.93□□□□□ -0.98
TRAF4-208ENST00000469529 ZNRF2Q8NHG8 242 aa8.93□□□□□ -0.98
TRAF4-208ENST00000469529 WWC2-AS2Q96NR7 200 aa8.93□□□□□ -0.98
TRAF4-208ENST00000469529 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
TRAF4-208ENST00000469529 NACAE9PAV3 2078 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 PAX4O43316 350 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 FCER1GP30273 86 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 TMEM97Q5BJF2 176 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 RNASEKQ6P5S7 137 aaKnown RBP8.92□□□□□ -0.98
TRAF4-208ENST00000469529 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
TRAF4-208ENST00000469529 F5H768 121 aa8.91□□□□□ -0.98
TRAF4-208ENST00000469529 TSHBP01222 138 aa8.91□□□□□ -0.98
TRAF4-208ENST00000469529 Q6ZTC4 211 aa8.91□□□□□ -0.98
TRAF4-208ENST00000469529 HIST1H2BLQ99880 126 aa8.91□□□□□ -0.98
TRAF4-208ENST00000469529 TENM3Q9P273 2699 aa8.91□□□□□ -0.98
TRAF4-208ENST00000469529 A0A096LNJ9 63 aa8.9□□□□□ -0.98
TRAF4-208ENST00000469529 IGHV1-24A0A0C4DH33 117 aa8.9□□□□□ -0.98
TRAF4-208ENST00000469529 S100A2P29034 98 aa8.9□□□□□ -0.98
TRAF4-208ENST00000469529 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.98
TRAF4-208ENST00000469529 TRAV10A0A0B4J240 114 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 HBDP02042 147 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms