RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 TRAV4A0A0B4J268 109 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 SPART-AS1P0CW21 52 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 TEX43Q6ZNM6 134 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
RPL39-202ENST00000468844 A0A1B0GV90 55 aa12.42□□□□□ -0.42
RPL39-202ENST00000468844 MGPP08493 103 aa12.42□□□□□ -0.42
RPL39-202ENST00000468844 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
RPL39-202ENST00000468844 OR4C5Q8NGB2 326 aa12.42□□□□□ -0.42
RPL39-202ENST00000468844 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
RPL39-202ENST00000468844 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
RPL39-202ENST00000468844 ZNF56Q15929 161 aa12.41□□□□□ -0.42
RPL39-202ENST00000468844 GAS8-AS1O95177 125 aa12.4□□□□□ -0.42
RPL39-202ENST00000468844 DAD1P61803 113 aa12.4□□□□□ -0.42
RPL39-202ENST00000468844 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
RPL39-202ENST00000468844 RHODO00212 210 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 AMTP48728 403 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 C18orf32Q8TCD1 76 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 TEX48A0A1B0GUV7 120 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 D6R8Y8 96 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 F5H697 171 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 NCR2O95944 276 aa12.39□□□□□ -0.43
RPL39-202ENST00000468844 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
RPL39-202ENST00000468844 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
RPL39-202ENST00000468844 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
RPL39-202ENST00000468844 Q6ZSN1 163 aa12.38□□□□□ -0.43
RPL39-202ENST00000468844 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
RPL39-202ENST00000468844 PMCHP20382 165 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 KRTDAPP60985 99 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 Q8N976 141 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 LYSTQ99698 3801 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 DYNC2H1Q8NCM8 4307 aaKnown RBP12.37□□□□□ -0.43
RPL39-202ENST00000468844 EREGO14944 169 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 CKS2P33552 79 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
RPL39-202ENST00000468844 FHL2Q14192 279 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 NIT1Q86X76 327 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 ALKBH7Q9BT30 221 aaPredicted RBP12.36□□□□□ -0.43
RPL39-202ENST00000468844 SNHG12Q9BXW3 62 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 U3KQK5 164 aa12.36□□□□□ -0.43
RPL39-202ENST00000468844 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 M0QY20 66 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 M0R143 59 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 CIDEAO60543 219 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 FAM19A2Q8N3H0 131 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 PAM16Q9Y3D7 125 aa12.35□□□□□ -0.43
RPL39-202ENST00000468844 PPBPP02775 128 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 ATP5G1P05496 136 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
RPL39-202ENST00000468844 Q6ZTC4 211 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 NRACQ8N912 160 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
RPL39-202ENST00000468844 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 Q9UF83 564 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 STARD9Q9P2P6 4700 aa12.34□□□□□ -0.43
RPL39-202ENST00000468844 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 P0DMU3 169 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 PLECQ15149 4684 aaKnown RBP12.33□□□□□ -0.44
RPL39-202ENST00000468844 NPYP01303 97 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
RPL39-202ENST00000468844 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
RPL39-202ENST00000468844 HSBP1O75506 76 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 H7C1H1 209 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 K7EQD1 137 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
RPL39-202ENST00000468844 HTN3P15516 51 aa12.3□□□□□ -0.44
RPL39-202ENST00000468844 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
RPL39-202ENST00000468844 F5H768 121 aa12.29□□□□□ -0.44
RPL39-202ENST00000468844 CRYBA4P53673 196 aa12.29□□□□□ -0.44
RPL39-202ENST00000468844 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
RPL39-202ENST00000468844 NEXN-AS1Q8NBZ9 246 aa12.29□□□□□ -0.44
RPL39-202ENST00000468844 URB1-AS1Q96HZ7 61 aa12.29□□□□□ -0.44
RPL39-202ENST00000468844 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
RPL39-202ENST00000468844 RHOHQ15669 191 aa12.28□□□□□ -0.44
RPL39-202ENST00000468844 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.44
RPL39-202ENST00000468844 PPP1R17O96001 155 aa12.27□□□□□ -0.44
RPL39-202ENST00000468844 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.44
RPL39-202ENST00000468844 SPATA45Q537H7 98 aa12.27□□□□□ -0.44
RPL39-202ENST00000468844 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
RPL39-202ENST00000468844 TRBV6-5A0A0K0K1A5 114 aa12.27□□□□□ -0.45
RPL39-202ENST00000468844 VSIG2Q96IQ7 327 aa12.27□□□□□ -0.45
RPL39-202ENST00000468844 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
RPL39-202ENST00000468844 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
RPL39-202ENST00000468844 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
RPL39-202ENST00000468844 A0A0J9YY99 117 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 BTF3P20290 206 aaKnown RBP12.25□□□□□ -0.45
RPL39-202ENST00000468844 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms