RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CIDEAO60543 219 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 IGKCP01834 107 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 FGF6P10767 208 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 FXYD7P58549 80 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 NSUN5P1Q3KNT7 163 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 MORN3Q6PF18 240 aaPredicted RBP5.55□□□□□ -1.52
COL6A3-208ENST00000468792 C2orf66Q6UXQ4 117 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 C12orf54Q6X4T0 127 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 NEXN-AS1Q8NBZ9 246 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 IL17DQ8TAD2 202 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 DNAJC30Q96LL9 226 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 LINC01587Q99440 93 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 C1QTNF4Q9BXJ3 329 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 JPT2Q9H910 190 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 C19orf73Q9NVV2 129 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 CYSLTR1Q9Y271 337 aa5.55□□□□□ -1.52
COL6A3-208ENST00000468792 A0A087WWL8 130 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 A0A1W2PRX2 142 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 F5H697 171 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 H0Y8G0 127 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 I3L3M4 83 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 SAP30O75446 220 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 CRYBA4P53673 196 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 C11orf44Q8N8P7 122 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 C18orf15Q96N68 181 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 SMR3AQ99954 134 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 HIVEP1P15822 2718 aa5.54□□□□□ -1.52
COL6A3-208ENST00000468792 RS1O15537 224 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 CRLF1O75462 422 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 IGHV3-53P01767 116 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 DAZ2Q13117 558 aaKnown RBP5.53□□□□□ -1.52
COL6A3-208ENST00000468792 ZNF56Q15929 161 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 ZNF124Q15973 351 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 C1orf158Q8N1D5 194 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
COL6A3-208ENST00000468792 TMEM263Q8WUH6 116 aaKnown RBP5.53□□□□□ -1.52
COL6A3-208ENST00000468792 MCRIP2Q9BUT9 160 aaKnown RBP5.53□□□□□ -1.52
COL6A3-208ENST00000468792 HIGD1BQ9P298 99 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 PYGO1Q9Y3Y4 419 aa5.53□□□□□ -1.52
COL6A3-208ENST00000468792 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
COL6A3-208ENST00000468792 FAM74A4Q5TZK3 123 aa5.52□□□□□ -1.53
COL6A3-208ENST00000468792 C2orf91Q6ZV80 131 aa5.52□□□□□ -1.53
COL6A3-208ENST00000468792 STPG4Q8N801 248 aa5.52□□□□□ -1.53
COL6A3-208ENST00000468792 BAALCQ8WXS3 180 aa5.52□□□□□ -1.53
COL6A3-208ENST00000468792 MRPL35Q9NZE8 188 aaKnown RBP5.52□□□□□ -1.53
COL6A3-208ENST00000468792 WNK1Q9H4A3 2382 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 TRBV10-1A0A0K0K1A3 114 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 A0A1B0GV90 55 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 PRSS29PA6NIE9 313 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 INAFM1C9JVW0 142 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 TSHBP01222 138 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 GIG44P09565 113 aaPredicted RBP5.51□□□□□ -1.53
COL6A3-208ENST00000468792 SEC11AP67812 179 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 PMVKQ15126 192 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 ZC2HC1BQ5TFG8 222 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 C20orf203Q8NBC4 194 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 CSNK1G2-AS1Q8NCQ2 148 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 OVOL2Q9BRP0 275 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 TMEM208Q9BTX3 173 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 TP53TG1Q9Y2A0 90 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 CHTOPQ9Y3Y2 248 aaKnown RBP5.51□□□□□ -1.53
COL6A3-208ENST00000468792 C2CD3Q4AC94 2353 aa5.51□□□□□ -1.53
COL6A3-208ENST00000468792 P0DMU3 169 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 FAM231AP0DMU4 169 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 FAM231CP0DMU5 169 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 GAGE1Q13065 139 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 BVES-AS1Q5T3Y7 98 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 C9orf66Q5T8R8 295 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 CITED1Q99966 193 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 TNFRSF18Q9Y5U5 241 aa5.5□□□□□ -1.53
COL6A3-208ENST00000468792 FN1P02751 2386 aaKnown RBP5.49□□□□□ -1.53
COL6A3-208ENST00000468792 TRAV4A0A0B4J268 109 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 E9PLD3 99 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 WIPF1O43516 503 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 HTN1P15515 57 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 AZU1P20160 251 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 HSD52Q0P140 79 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 MPV17L2Q567V2 206 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 TMEM97Q5BJF2 176 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 NFE4Q86UQ8 179 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 WFDC9Q8NEX5 89 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 ORAOV1Q8WV07 137 aa5.49□□□□□ -1.53
COL6A3-208ENST00000468792 ZMAT5Q9UDW3 170 aaKnown RBP5.49□□□□□ -1.53
COL6A3-208ENST00000468792 NACAE9PAV3 2078 aa5.48□□□□□ -1.53
COL6A3-208ENST00000468792 SMIM9A6NGZ8 99 aa5.48□□□□□ -1.53
COL6A3-208ENST00000468792 C11orf86A6NJI1 115 aa5.48□□□□□ -1.53
COL6A3-208ENST00000468792 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
COL6A3-208ENST00000468792 NMUP48645 174 aa5.48□□□□□ -1.53
COL6A3-208ENST00000468792 HINT1P49773 126 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms