RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 P0DMU3 169 aa9.85□□□□□ -0.83
UBE4B-206ENST00000466379 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
UBE4B-206ENST00000466379 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
UBE4B-206ENST00000466379 C19orf73Q9NVV2 129 aa9.85□□□□□ -0.83
UBE4B-206ENST00000466379 CRLF1O75462 422 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 BEAN1Q3B7T3 259 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 SLC25A34Q6PIV7 304 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-206ENST00000466379 VCYO14598 125 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 ZFP2Q6ZN57 461 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 LINC00467Q9BRT7 94 aa9.84□□□□□ -0.83
UBE4B-206ENST00000466379 MRPL35Q9NZE8 188 aaKnown RBP9.84□□□□□ -0.83
UBE4B-206ENST00000466379 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
UBE4B-206ENST00000466379 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
UBE4B-206ENST00000466379 K7EMI3 77 aa9.83□□□□□ -0.84
UBE4B-206ENST00000466379 HINT1P49773 126 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-206ENST00000466379 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-206ENST00000466379 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 NUTF2P61970 127 aaKnown RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 Q6ZSN1 163 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 ZMAT4Q9H898 229 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 TP53TG1Q9Y2A0 90 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 IGKCP01834 107 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 COX8AP10176 69 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
UBE4B-206ENST00000466379 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 Q9UF83 564 aa9.82□□□□□ -0.84
UBE4B-206ENST00000466379 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 DPM2O94777 84 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 A0A087WX48 190 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 A8MWV9 139 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 NMUP48645 174 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-206ENST00000466379 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
UBE4B-206ENST00000466379 FGF6P10767 208 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 GTSCR1Q86UQ5 136 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 CYSLTR1Q9Y271 337 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
UBE4B-206ENST00000466379 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 TSHBP01222 138 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 ERASQ7Z444 233 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 RNASE8Q8TDE3 154 aaKnown RBP9.79□□□□□ -0.84
UBE4B-206ENST00000466379 TENM1Q9UKZ4 2725 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 TRGV1A0A0A0MS02 117 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 C2orf91Q6ZV80 131 aa9.79□□□□□ -0.84
UBE4B-206ENST00000466379 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 PTH2Q96A98 100 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 FAM110AQ9BQ89 295 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 TTTY13Q9BZ97 58 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 VWFP04275 2813 aa9.78□□□□□ -0.84
UBE4B-206ENST00000466379 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.84
UBE4B-206ENST00000466379 H7C1H1 209 aa9.77□□□□□ -0.84
UBE4B-206ENST00000466379 RIPPLY3P57055 190 aa9.77□□□□□ -0.84
UBE4B-206ENST00000466379 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 IGIPA6NJ69 53 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 F8VRH5 84 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 I3L3M4 83 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 RS1O15537 224 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 Q6ZTI0 123 aa9.77□□□□□ -0.85
UBE4B-206ENST00000466379 IGHV3-53P01767 116 aa9.76□□□□□ -0.85
UBE4B-206ENST00000466379 BOD1L2Q8IYS8 172 aa9.76□□□□□ -0.85
UBE4B-206ENST00000466379 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
UBE4B-206ENST00000466379 EMP1P54849 157 aa9.76□□□□□ -0.85
UBE4B-206ENST00000466379 TMEM263Q8WUH6 116 aaKnown RBP9.76□□□□□ -0.85
UBE4B-206ENST00000466379 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-206ENST00000466379 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
UBE4B-206ENST00000466379 NOP10Q9NPE3 64 aaKnown RBP9.76□□□□□ -0.85
UBE4B-206ENST00000466379 PLNP26678 52 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 CSNK1G2-AS1Q8NCQ2 148 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 FLNBO75369 2602 aaKnown RBP9.75□□□□□ -0.85
UBE4B-206ENST00000466379 IGHV3-38A0A0C4DH36 116 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 RHODO00212 210 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 RHOHQ15669 191 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 COL5A1-AS1Q5SY13 56 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 OR4C5Q8NGB2 326 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 ZNF479Q96JC4 524 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 CITED1Q99966 193 aa9.75□□□□□ -0.85
UBE4B-206ENST00000466379 F8P00451 2351 aa9.74□□□□□ -0.85
UBE4B-206ENST00000466379 G0S2P27469 103 aa9.74□□□□□ -0.85
UBE4B-206ENST00000466379 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 C20orf203Q8NBC4 194 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 PHLDA1Q8WV24 401 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-206ENST00000466379 BVES-AS1Q5T3Y7 98 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 Q6ZVH6 145 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
UBE4B-206ENST00000466379 C1QTNF4Q9BXJ3 329 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms