RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 A0A087WZ39 114 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 ANKRD20A5PA0PJZ0 165 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 TSC22D2O75157 780 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 SSBP1Q04837 148 aaKnown RBP3.4□□□□□ -1.87
NCL-208ENST00000466274 GCSAMLQ5JQS6 135 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 FAM74A1Q5RGS3 127 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 FAM74A4Q5TZK3 123 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 MIC13Q5XKP0 118 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 NRARPQ7Z6K4 114 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 C15orf56Q8N910 161 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 CMTM2Q8TAZ6 248 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 FUNDC2Q9BWH2 189 aa3.4□□□□□ -1.87
NCL-208ENST00000466274 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
NCL-208ENST00000466274 IGLV5-45A0A087WSX0 123 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 GVQW2A0A096LPI5 108 aaPredicted RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 FAM24AA6NFZ4 105 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 FAM25AB3EWG3 89 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 FAM25CB3EWG5 89 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 FAM25GB3EWG6 89 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 F6UZH7 168 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 CTDSP2O14595 271 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 SSSCA1O60232 199 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 AKAIN1P0CW23 69 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 RNASE3P12724 160 aaKnown RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 SULT1A2P50226 295 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 TAS2R30P59541 319 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 RANP62826 216 aaKnown RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 PPP1R1AQ13522 171 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 EIF5AL1Q6IS14 154 aaKnown RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 GAGE2AQ6NT46 116 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 Q75L30 129 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 CLVS1Q8IUQ0 354 aaPredicted RBP3.39□□□□□ -1.87
NCL-208ENST00000466274 OR10G8Q8NGN5 311 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 MITD1Q8WV92 249 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 DIRAS2Q96HU8 199 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 FAM167A-AS1Q96KT0 104 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 CARD19Q96LW7 228 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 OR5AC2Q9NZP5 309 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
NCL-208ENST00000466274 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 LOC107984640A0A0U1RRK4 108 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 M0R2T5 61 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 FGF6P10767 208 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 CTAG1AP78358 180 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 MT1HP80294 61 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
NCL-208ENST00000466274 ZFP69Q49AA0 526 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 ZC2HC1BQ5TFG8 222 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 PRR27Q6MZM9 219 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 ISOC2Q96AB3 205 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 TVP23CQ96ET8 276 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 RETNLBQ9BQ08 111 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 DERL1Q9BUN8 251 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 C11orf1Q9H5F2 150 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
NCL-208ENST00000466274 IGHV1-24A0A0C4DH33 117 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 A0A1W2PNN7 141 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
NCL-208ENST00000466274 UBE2V1Q13404 147 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 TMEM128Q5BJH2 165 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
NCL-208ENST00000466274 OR11H4Q8NGC9 324 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 PHYHIPLQ96FC7 376 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 HYLS1Q96M11 299 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 AQP10Q96PS8 301 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 BCL7BQ9BQE9 202 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 RPP21Q9H633 154 aaKnown RBP3.37□□□□□ -1.87
NCL-208ENST00000466274 JPT2Q9H910 190 aa3.37□□□□□ -1.87
NCL-208ENST00000466274 SFT2D2O95562 160 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 RAB4BP61018 213 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 BAXQ07812 192 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 IQCJQ1A5X6 159 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 SPANXN2Q5MJ10 180 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 GOLT1AQ6ZVE7 132 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
NCL-208ENST00000466274 C20orf203Q8NBC4 194 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 FXYD5Q96DB9 178 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 SFRP2Q96HF1 295 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 UQCC1Q9NVA1 299 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 IL36BQ9NZH7 164 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 WDR83OSQ9Y284 106 aa3.36□□□□□ -1.87
NCL-208ENST00000466274 USH2AO75445 5202 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 IGHV1-58A0A0C4DH39 117 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 TRBV6-1A0A0K0K1D8 114 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 C7orf66A4D0T2 115 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 K7EQM0 130 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 OR7C2O60412 319 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 TSHBP01222 138 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms