RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 IGKV3-15P01624 115 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 PRH1P02810 166 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 IGKV1D-39P04432 117 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 CCL5P13501 91 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 NPPCP23582 126 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 CAV3P56539 151 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 RBM3P98179 157 aaKnown RBP2.23□□□□□ -2.05
SNX4-202ENST00000465505 REG3AQ06141 175 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 BSPH1Q075Z2 132 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 SYCNQ0VAF6 134 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 Q6JHZ5 121 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 SOSTDC1Q6X4U4 206 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 FAM223AQ8IWN6 122 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 CLECL1Q8IZS7 167 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 TMEM61Q8N0U2 210 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 DAND5Q8N907 189 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 Q8NBF4 154 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 PFN4Q8NHR9 129 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 FAM167A-AS1Q96KT0 104 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 PLA2G12AQ9BZM1 189 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 NHP2Q9NX24 153 aaKnown RBP2.23□□□□□ -2.05
SNX4-202ENST00000465505 PLXNB2O15031 1838 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
SNX4-202ENST00000465505 MALRD1Q5VYJ5 2156 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 TRAV7A0A075B6U4 112 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 IGLV3-32A0A0A0MS00 114 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-74A0A0B4J1X5 117 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-43A0A0B4J1X8 118 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-72A0A0B4J1Y9 119 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 C16orf90A8MZG2 172 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 ERC2-IT1O76042 136 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 LEPROTL1O95214 131 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 HMGN2P05204 90 aaKnown RBP2.22□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-30-3P0DP02 117 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 DYNLT1P63172 113 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 ESPL1Q14674 2120 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 LYPD2Q6UXB3 125 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 ZNF826PQ6ZT77 177 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 LINC00269Q8N2A0 174 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 ZFAND2AQ8N6M9 145 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 ZNF563Q8TA94 476 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 DYNLRB2Q8TF09 96 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 TMEM141Q96I45 108 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 C11orf1Q9H5F2 150 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 DPM3Q9P2X0 92 aa2.22□□□□□ -2.05
SNX4-202ENST00000465505 LRP6O75581 1613 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 IGHV3-35A0A0C4DH35 117 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 TRBV10-3A0A0K0K1G6 114 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 IQCF6A8MYZ5 107 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 RTL8CO15255 209 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 IGLV1-51P01701 117 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 CCL3P10147 92 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 MIFP14174 115 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 TSPEAR-AS2P59090 65 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 FAM19A2Q8N3H0 131 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 MED12Q93074 2177 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 SCGB3A1Q96QR1 104 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 LINC00467Q9BRT7 94 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 LINC00574Q9H8X3 128 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 DNAJC13O75165 2243 aa2.21□□□□□ -2.06
SNX4-202ENST00000465505 FREM3P0C091 2139 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 BRWD3Q6RI45 1802 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 TRBV25-1A0A075B6N4 114 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 FAM223BA6NKX1 122 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 IGHV3-11P01762 117 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
SNX4-202ENST00000465505 ZNF117Q03924 483 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 DYNAPQ8N1N2 210 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 NPBQ8NG41 125 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 SMCR5Q8TEV8 140 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 OCR1Q9BZK8 76 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 BPESC1Q9GZL8 116 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 DOCK10Q96BY6 2186 aa2.2□□□□□ -2.06
SNX4-202ENST00000465505 ARFGEF3Q5TH69 2177 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 IGHV1OR15-9A0A0B4J2B8 117 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 E7EUB6 86 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 SH2D1AO60880 128 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 WISP3O95389 354 aaPredicted RBP2.19□□□□□ -2.06
SNX4-202ENST00000465505 IFI6P09912 130 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 CGB3P0DN86 165 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 CGB7P0DN87 165 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 COX7A1P24310 79 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 SERF2P84101 59 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 PLGLAQ15195 96 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 ATXN8Q156A1 80 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 FAM229BQ4G0N7 80 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 ORMDL3Q8N138 153 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 RPRMLQ8N4K4 120 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 C1orf147Q96MC9 270 aaPredicted RBP2.19□□□□□ -2.06
SNX4-202ENST00000465505 PRO1854Q9UHT4 67 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 CELA1Q9UNI1 258 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 PHLDA3Q9Y5J5 127 aa2.19□□□□□ -2.06
SNX4-202ENST00000465505 LTBP1Q14766 1721 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms