RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CSTL1Q9H114 145 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
COL5A1-205ENST00000464187 NMUP48645 174 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 RPL32P62910 135 aaKnown RBP10.61□□□□□ -0.71
COL5A1-205ENST00000464187 Q6ZVH6 145 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 PCP2Q8IVA1 136 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 STHQ8IWL8 128 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 SYT8Q8NBV8 401 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 MRPL35Q9NZE8 188 aaKnown RBP10.61□□□□□ -0.71
COL5A1-205ENST00000464187 A0A087WX48 190 aa10.6□□□□□ -0.71
COL5A1-205ENST00000464187 WFDC10AQ9H1F0 79 aa10.6□□□□□ -0.71
COL5A1-205ENST00000464187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.59□□□□□ -0.71
COL5A1-205ENST00000464187 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
COL5A1-205ENST00000464187 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 IGKV2D-26A0A0A0MRZ7 120 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 NPSP0C0P6 89 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
COL5A1-205ENST00000464187 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 C2orf66Q6UXQ4 117 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 F5H697 171 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 WIPF1O43516 503 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 CRYGDP07320 174 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
COL5A1-205ENST00000464187 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 CLUHP3Q96NS8 147 aa10.58□□□□□ -0.72
COL5A1-205ENST00000464187 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
COL5A1-205ENST00000464187 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
COL5A1-205ENST00000464187 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 CBY3A6NI87 242 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 SIVA1O15304 175 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 ZNF56Q15929 161 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 TMEM97Q5BJF2 176 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
COL5A1-205ENST00000464187 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 TAX1BP3O14907 124 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
COL5A1-205ENST00000464187 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 F8VRH5 84 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 H7C1H1 209 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 M0QY20 66 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 PLNP26678 52 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 ZNF876PQ49A33 203 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 MDFIQ99750 246 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 TTTY13Q9BZ97 58 aa10.55□□□□□ -0.72
COL5A1-205ENST00000464187 VCYO14598 125 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 ERASQ7Z444 233 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 DEFB104AQ8WTQ1 72 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
COL5A1-205ENST00000464187 HSD52Q0P140 79 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
COL5A1-205ENST00000464187 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
COL5A1-205ENST00000464187 HTN1P15515 57 aa10.53□□□□□ -0.72
COL5A1-205ENST00000464187 RPL35AP18077 110 aaKnown RBP10.53□□□□□ -0.72
COL5A1-205ENST00000464187 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
COL5A1-205ENST00000464187 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
COL5A1-205ENST00000464187 ANK2Q01484 3957 aa10.53□□□□□ -0.72
COL5A1-205ENST00000464187 PRM2P04554 102 aa10.52□□□□□ -0.73
COL5A1-205ENST00000464187 SEC11AP67812 179 aa10.52□□□□□ -0.73
COL5A1-205ENST00000464187 TSHBP01222 138 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 INSP01308 110 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 RIPPLY3P57055 190 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 PRSS29PA6NIE9 313 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 IGIPA6NJ69 53 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
COL5A1-205ENST00000464187 HIGD1BQ9P298 99 aa10.51□□□□□ -0.73
COL5A1-205ENST00000464187 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
COL5A1-205ENST00000464187 ZNF415Q09FC8 603 aa10.5□□□□□ -0.73
COL5A1-205ENST00000464187 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
COL5A1-205ENST00000464187 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 CMYA5Q8N3K9 4069 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 M0R2P5 195 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 CCL25O15444 150 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 LINC01587Q99440 93 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 CHAC1Q9BUX1 264 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
COL5A1-205ENST00000464187 RHOHQ15669 191 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 C11orf72Q8NBR9 251 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 TIMM17AQ99595 171 aa10.48□□□□□ -0.73
COL5A1-205ENST00000464187 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms