RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 IGKV2D-24A0A075B6R9 120 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 TMSB15BA0A087X1C1 80 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 RBFOX3A6NFN3 312 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 ARPC5O15511 151 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 AKR1C3P42330 323 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 KLK12Q9UKR0 248 aa5.73□□□□□ -1.49
HDAC9-220ENST00000461409 UMAD1C9J7I0 102 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 RAB4BP61018 213 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 UBE2D3P61077 147 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 PKIAP61925 76 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 UBE2D2P62837 147 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 Q0VG73 95 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 C14orf177Q52M58 125 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-220ENST00000461409 BAALCQ8WXS3 180 aa5.72□□□□□ -1.49
HDAC9-220ENST00000461409 G3V3Q6 166 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 PAGE4O60829 102 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 PFDN1O60925 122 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 CXCL1P09341 107 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 RGS21Q2M5E4 152 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 ATRAIDQ6UW56 229 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 OR10G8Q8NGN5 311 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 SFT2D1Q8WV19 159 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 UBE2WQ96B02 151 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 CYTL1Q9NRR1 136 aa5.71□□□□□ -1.5
HDAC9-220ENST00000461409 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 TMEM262E9PQX1 116 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 CRPP02741 224 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 ZNF345Q14585 488 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 ZNF56Q15929 161 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 FAM213BQ8TBF2 198 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 DEFB104AQ8WTQ1 72 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 CHAC1Q9BUX1 264 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
HDAC9-220ENST00000461409 ZNF471Q9BX82 626 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-220ENST00000461409 OR5AL1P0C617 328 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 TMEM97Q5BJF2 176 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 SPANXN1Q5VSR9 72 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 PRR27Q6MZM9 219 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 SCXQ7RTU7 201 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 BAGE2Q86Y30 109 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 KCNRGQ8N5I3 272 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 MBD3L1Q8WWY6 194 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 MLST8Q9BVC4 326 aa5.69□□□□□ -1.5
HDAC9-220ENST00000461409 A0A0D9SG52 128 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 KANTRA0A1W2PQU2 76 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 F5H697 171 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 SNAI2O43623 268 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 ANGP03950 147 aaKnown RBP5.68□□□□□ -1.5
HDAC9-220ENST00000461409 SMIM17P0DL12 118 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 EIF5AP63241 154 aaKnown RBP5.68□□□□□ -1.5
HDAC9-220ENST00000461409 RPL19P84098 196 aaKnown RBP5.68□□□□□ -1.5
HDAC9-220ENST00000461409 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 C15orf54Q8N8G6 183 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 NEXN-AS1Q8NBZ9 246 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 AP1S3Q96PC3 154 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 CHCHD5Q9BSY4 110 aa5.68□□□□□ -1.5
HDAC9-220ENST00000461409 A0A1B0GV50 99 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 HMSDA8MTL9 139 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-220ENST00000461409 BCL2L11O43521 198 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 MIAQ16674 131 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 MPV17L2Q567V2 206 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 ENHOQ6UWT2 76 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
HDAC9-220ENST00000461409 SMLR1H3BR10 107 aa5.66□□□□□ -1.5
HDAC9-220ENST00000461409 H7C1H1 209 aa5.66□□□□□ -1.5
HDAC9-220ENST00000461409 RPL35P42766 123 aaKnown RBP5.66□□□□□ -1.5
HDAC9-220ENST00000461409 TMUB2Q71RG4 321 aa5.66□□□□□ -1.5
HDAC9-220ENST00000461409 MANBALQ9NQG1 85 aa5.66□□□□□ -1.5
HDAC9-220ENST00000461409 VAX2Q9UIW0 290 aa5.66□□□□□ -1.5
HDAC9-220ENST00000461409 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 MUC21A0A140T8X8 626 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 USP17L23D6RBM5 183 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 TEX46H3BTG2 121 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 IGLV2-8P01709 118 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 HLA-DQA1P01909 254 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 RPS20P60866 119 aaKnown RBP5.65□□□□□ -1.5
HDAC9-220ENST00000461409 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 C11orf52Q96A22 123 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
HDAC9-220ENST00000461409 DERL1Q9BUN8 251 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 PRR34Q9NV39 138 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 GNG13Q9P2W3 67 aa5.65□□□□□ -1.5
HDAC9-220ENST00000461409 TRAV1-1A0A0B4J248 108 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 RAB5CP51148 216 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 SSTP61278 116 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 RBX1P62877 108 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 CACNG7P62955 275 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 IQCJQ1A5X6 159 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 CENPWQ5EE01 88 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
HDAC9-220ENST00000461409 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms